30170.m013698 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 30170.m013698 T283905_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.805 0.892
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.801 0.882
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.801 0.882
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.801 0.882
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.784 0.871
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.784 0.871
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.784 0.871
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.759 0.849
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.759 0.849
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.759 0.849
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.759 0.849
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.759 0.849
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.701 0.763
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.666 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30170.m013698 Myb 16 62
30170.m013698 Myb 68 113

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

319 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ECANG7_05481 Echinococcus canadensis ECANG7_05481 N 0.000
MCOS_0000526101 Mesocestoides corti MCOS_0000526101 N 0.000
HNAJ_0001249801 Hymenolepis nana HNAJ_0001249801 N 0.000
HNAJ_0000974401 Hymenolepis nana HNAJ_0000974401 N 0.000
HmN_000813000 Hymenolepis microstoma HmN_000813000 N 0.000
HmN_000466000 Hymenolepis microstoma HmN_000466000 N 0.000
HDID_0000237901 Hymenolepis diminuta HDID_0000237901 N 0.000
HCOI00860100 Haemonchus contortus HCOI00860100 N 0.000
Hba_13817 Heterorhabditis bacteriophora Hba_13817 N 0.000
EmuJ_001049000 Echinococcus multilocularis EmuJ_001049000 N 0.000
EmuJ_000768300 Echinococcus multilocularis EmuJ_000768300 N 0.000
MCOS_0000726501 Mesocestoides corti MCOS_0000726501 N 0.000
ECANG7_02036 Echinococcus canadensis ECANG7_02036 N 0.000
DILT_0001497901 Diphyllobothrium latum DILT_0001497901 N 0.000
DILT_0000548601 Diphyllobothrium latum DILT_0000548601 N 0.000
D915_15256 Fasciola hepatica D915_15256 N 0.000
D915_00818 Fasciola hepatica D915_00818 N 0.000
csin110255 Clonorchis sinensis csin110255 N 0.000
ACOC_0000768601 Angiostrongylus costaricensis ACOC_0000768601 N 0.000
A_05510 Schistosoma haematobium A_05510 N 0.000
MDOA008812 Musca domestica MDOA008812 N 0.000
SROB_0000153901 Schistosoma rodhaini SROB_0000153901 N 0.000
TTAC_0000225801 Hydatigera taeniaeformis TTAC_0000225801 N 0.000
TTAC_0000194001 Hydatigera taeniaeformis TTAC_0000194001 N 0.000
TsM_000115400 Taenia solium TsM_000115400 N 0.000
TsM_000088100 Taenia solium TsM_000088100 N 0.000
TRE_0000506801 Trichobilharzia regenti TRE_0000506801 N 0.000
TELCIR_07111 Teladorsagia circumcincta TELCIR_07111 N 0.000
T265_14643 Opisthorchis viverrini T265_14643 N 0.000
T265_12733 Opisthorchis viverrini T265_12733 N 0.000
SSLN_0000493501 Schistocephalus solidus SSLN_0000493501 N 0.000
SROB_0001061001 Schistosoma rodhaini SROB_0001061001 N 0.000
ASIS000124 Anopheles sinensis ASIS000124 N 0.000
SMTD_0001194601 Schistosoma mattheei SMTD_0001194601 N 0.000
SMRZ_0001808901 Schistosoma margrebowiei SMRZ_0001808901 N 0.000
SMRZ_0000146101 Schistosoma margrebowiei SMRZ_0000146101 N 0.000
SCUD_0000067701 Schistosoma curassoni SCUD_0000067701 N 0.000
SCUD_0000020101 Schistosoma curassoni SCUD_0000020101 N 0.000
PXEA_0002175501 Protopolystoma xenopodis PXEA_0002175501 N 0.000
PXEA_0000566701 Protopolystoma xenopodis PXEA_0000566701 N 0.000
NECAME_09126 Necator americanus NECAME_09126 N 0.000
NBR_0000911001 Nippostrongylus brasiliensis NBR_0000911001 N 0.000
GH12282 Drosophila grimshawi FBgn0119761 N 0.000
Smp_103530 Schistosoma mansoni Smp_103530 N 0.000
Smp_000980 Schistosoma mansoni Smp_000980 N 0.000
SMAR013695 Strigamia maritima SMAR013695 N 0.000
NV15664 Nasonia vitripennis NV15664 N 0.000
ISCW017350 Ixodes scapularis ISCW017350 N 0.000
GE17263 Drosophila yakuba FBgn0234741 N 0.000
GK25058 Drosophila willistoni FBgn0227017 N 0.000
GJ19445 Drosophila virilis FBgn0206588 N 0.000
GD17278 Drosophila simulans FBgn0188840 N 0.000
GI10980 Drosophila mojavensis FBgn0133743 N 0.000
SPU_005572 Strongylocentrotus purpuratus SPU_005572 N 0.000
GG17955 Drosophila erecta FBgn0110175 N 0.000
GF19115 Drosophila ananassae FBgn0096126 N 0.000
GA11488 Drosophila pseudoobscura FBgn0071539 N 0.000
Dsp1 Drosophila melanogaster FBgn0011764 N 0.000
DAPPUDRAFT_232871 Daphnia pulex DAPPUDRAFT_232871 N 0.000
CPIJ014043 Culex quinquefasciatus CPIJ014043 N 0.000
AGAP000005 Anopheles gambiae AGAP000005 N 0.000
ADAC001494 Anopheles darlingi ADAC001494 N 0.000
AAEL011380 Aedes aegypti AAEL011380 N 0.000
AARA010318 Anopheles arabiensis AARA010318 N 0.000
AMIN005344 Anopheles minimus AMIN005344 N 0.000
AMEM017336 Anopheles merus AMEM017336 N 0.000
AMEC021909 Anopheles melas AMEC021909 N 0.000
AMAM015540 Anopheles maculatus AMAM015540 N 0.000
AFUN010134 Anopheles funestus AFUN010134 N 0.000
AFAF003948 Anopheles farauti AFAF003948 N 0.000
AEPI002924 Anopheles epiroticus AEPI002924 N 0.000
ADIR011701 Anopheles dirus ADIR011701 N 0.000
ACUA021022 Anopheles culicifacies ACUA021022 N 0.000
AATE018776 Anopheles atroparvus AATE018776 N 0.000
CpipJ_CPIJ014043 Culex pipiens CpipJ_CPIJ014043 N 0.000
AALB006743 Anopheles albimanus AALB006743 N 0.000
SMU15030256 Schmidtea mediterranea SMU15030256 N 0.000
SMU15016767 Schmidtea mediterranea SMU15016767 N 0.000
Sjc_0031360 Schistosoma japonicum Sjc_0031360 N 0.000
LCUP007363 Lucilia cuprina LCUP007363 N 0.000
Sakowv30042012m.g Saccoglossus kowalevskii Sakowv30042012m.g N 0.000
fgenesh2_pm.scaffold_24000033 Branchiostoma floridae fgenesh2_pm.scaffold_24000033 N 0.000
tetur02g08340 Tetranychus urticae tetur02g08340 N 0.000
tetur02g08260 Tetranychus urticae tetur02g08260 N 0.000