cassava39493.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava39493.m1 T284256_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava39493.m1 Myb 22 80

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_11.127 Carica papaya evm.TU.supercontig_11.127 N 0.766
VIT_02s0087g00140 Vitis vinifera VIT_02s0087g00140 N 0.685
VIT_08s0105g00400 Vitis vinifera VIT_08s0105g00400 N 0.847
Ca_10636 Cicer arietinum Ca_10636 N 0.730
Ca_22200 Cicer arietinum Ca_22200 N 0.762
estExt_gwp_gw1.C_2850022 Physcomitrella patens estExt_gwp_gw1.C_2850022 N 0.704
Bostr.6251s0108 Boechera stricta Bostr.6251s0108 N 0.721
Cagra.4082s0018 Capsella grandiflora Cagra.4082s0018 N 0.721
Cagra.4190s0013 Capsella grandiflora Cagra.4190s0013 N 0.713
Carubv10001432m.g Capsella rubella Carubv10001432m.g N 0.721
Ciclev10012342m.g Citrus clementina Ciclev10012342m.g N 0.783
Eucgr.E01205 Eucalyptus grandis Eucgr.E01205 N 0.729
TCM_021682 Theobroma cacao TCM_021682 N 0.817
gene13452-v1.0-hybrid Fragaria vesca gene13452-v1.0-hybrid N 0.724
Gorai.006G183000 Gossypium raimondii Gorai.006G183000 N 0.770
Lus10004806.g Linum usitatissimum Lus10004806.g N 0.843
MDP0000269977 Malus domestica MDP0000269977 N 0.709
MDP0000296708 Malus domestica MDP0000296708 N 0.709
orange1.1g022743m.g Citrus sinensis orange1.1g022743m.g N 0.783
SapurV1A.0001s0490 Salix purpurea SapurV1A.0001s0490 N 0.790
SapurV1A.0541s0070 Salix purpurea SapurV1A.0541s0070 N 0.788
Thhalv10015815m.g Eutrema salsugineum Thhalv10015815m.g N 0.721
PK23483.1 Cannabis sativa PK23483.1 N 0.702
chr2.CM0803.380.nc Lotus japonicus chr2.CM0803.380.nc N 0.730
GLYMA01G35370 Glycine max GLYMA01G35370 N 0.730
AMTR_s00048p00225900 Amborella trichopoda AMTR_s00048p00225900 N 0.697
GT-3B Arabidopsis thaliana AT2G38250 N 0.674
BGIOSGA014412 Oryza indica BGIOSGA014412 N 0.696
Bo3g001460 Brassica oleracea Bo3g001460 N 0.661
Bo3g032310 Brassica oleracea Bo3g032310 N 0.674
Bo4g029680 Brassica oleracea Bo4g029680 N 0.674
Bo9g186070 Brassica oleracea Bo9g186070 N 0.685
Bra000046 Brassica rapa Bra000046 N 0.674
Bra005127 Brassica rapa Bra005127 N 0.674
Bra005688 Brassica rapa Bra005688 N 0.721
fgenesh2_kg.6__73__AT5G01380.1 Arabidopsis lyrata fgenesh2_kg.6__73__AT5G01380.1 N 0.721
Al_scaffold_0004_2382 Arabidopsis lyrata Al_scaffold_0004_2382 N 0.674
MTR_4g015680 Medicago truncatula MTR_4g015680 N 0.772
MTR_5g026540 Medicago truncatula MTR_5g026540 N 0.730
OGLUM04G24100 Oryza glumaepatula OGLUM04G24100 N 0.696
OMERI04G20000 Oryza meridionalis OMERI04G20000 N 0.696
ONIVA04G23310 Oryza nivara ONIVA04G23310 N 0.696
ORGLA04G0207300 Oryza glaberrima ORGLA04G0207300 N 0.696
ORUFI04G25870 Oryza rufipogon ORUFI04G25870 N 0.696
PGSC0003DMG400030246 Solanum tuberosum PGSC0003DMG400030246 N 0.676
POPTR_0006s10240 Populus trichocarpa POPTR_0006s10240 N 0.782
POPTR_0016s12470 Populus trichocarpa POPTR_0016s12470 N 0.788
Solyc09g005560.2 Solanum lycopersicum Solyc09g005560.2 N 0.676