Cucsa.073130 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.073130 T284375_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.777 0.860
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.773 0.860
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.758 0.849
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.758 0.849
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.735 0.806
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.735 0.806
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.735 0.806
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.720 0.806
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.720 0.806
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.720 0.806
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.720 0.806
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.720 0.806
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.669 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.073130.1 Myb 9 55
Cucsa.073130.1 Myb 61 106

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

272 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK27693.1 Cannabis sativa PK27693.1 D 0.000
AT2G38090 Arabidopsis thaliana AT2G38090 D 0.000
Cagra.0090s0025 Capsella grandiflora Cagra.0090s0025 I 0.000
Gorai.002G261600 Gossypium raimondii Gorai.002G261600 I 0.000
gene18815-v1.0-hybrid Fragaria vesca gene18815-v1.0-hybrid I 0.000
gene07984-v1.0-hybrid Fragaria vesca gene07984-v1.0-hybrid I 0.000
evm.TU.supercontig_19.216 Carica papaya evm.TU.supercontig_19.216 I 0.000
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I 0.000
evm.TU.supercontig_112.58 Carica papaya evm.TU.supercontig_112.58 I 0.000
Eucgr.B02800 Eucalyptus grandis Eucgr.B02800 I 0.000
Ciclev10032309m.g Citrus clementina Ciclev10032309m.g I 0.000
Ciclev10012285m.g Citrus clementina Ciclev10012285m.g I 0.000
Carubv10023736m.g Capsella rubella Carubv10023736m.g I 0.000
Gorai.006G180900 Gossypium raimondii Gorai.006G180900 I 0.000
Bostr.23794s0264 Boechera stricta Bostr.23794s0264 I 0.000
mgf022442m Mimulus guttatus mgf022442m I 0.000
Cucsa.176140 Cucumis sativus Cucsa.176140 I 0.000
Cucsa.139090 Cucumis sativus Cucsa.139090 I 0.000
cassava43688.valid.m1 Manihot esculenta cassava43688.valid.m1 I 0.000
cassava30173.valid.m1 Manihot esculenta cassava30173.valid.m1 I 0.000
cassava26873.m1 Manihot esculenta cassava26873.m1 I 0.000
cassava23356.valid.m1 Manihot esculenta cassava23356.valid.m1 I 0.000
cassava1257.valid.m1 Manihot esculenta cassava1257.valid.m1 I 0.000
29610.m000410 Ricinus communis 29610.m000410 I 0.000
MDP0000277813 Malus domestica MDP0000277813 I 0.000
SapurV1A.3589s0010 Salix purpurea SapurV1A.3589s0010 I 0.000
SapurV1A.0778s0020 Salix purpurea SapurV1A.0778s0020 I 0.000
SapurV1A.0709s0190 Salix purpurea SapurV1A.0709s0190 I 0.000
SapurV1A.0262s0080 Salix purpurea SapurV1A.0262s0080 I 0.000
SapurV1A.0164s0380 Salix purpurea SapurV1A.0164s0380 I 0.000
SapurV1A.0041s0720 Salix purpurea SapurV1A.0041s0720 I 0.000
SapurV1A.0001s0790 Salix purpurea SapurV1A.0001s0790 I 0.000
orange1.1g023196m.g Citrus sinensis orange1.1g023196m.g I 0.000
orange1.1g021756m.g Citrus sinensis orange1.1g021756m.g I 0.000
MDP0000809640 Malus domestica MDP0000809640 I 0.000
Thhalv10017008m.g Eutrema salsugineum Thhalv10017008m.g I 0.000
MDP0000221993 Malus domestica MDP0000221993 I 0.000
MDP0000142580 Malus domestica MDP0000142580 I 0.000
Lus10040696.g Linum usitatissimum Lus10040696.g I 0.000
Lus10035518.g Linum usitatissimum Lus10035518.g I 0.000
Lus10018209.g Linum usitatissimum Lus10018209.g I 0.000
Gorai.012G112000 Gossypium raimondii Gorai.012G112000 I 0.000
Gorai.012G075600 Gossypium raimondii Gorai.012G075600 I 0.000
Gorai.009G093700 Gossypium raimondii Gorai.009G093700 I 0.000
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I 0.000
GLYMA14G37050 Glycine max GLYMA14G37050 I 0.000
POPTR_0008s06450 Populus trichocarpa POPTR_0008s06450 I 0.000
POPTR_0006s09860 Populus trichocarpa POPTR_0006s09860 I 0.000
POPTR_0001s25590 Populus trichocarpa POPTR_0001s25590 I 0.000
PGSC0003DMG400030348 Solanum tuberosum PGSC0003DMG400030348 I 0.000
PGSC0003DMG400027126 Solanum tuberosum PGSC0003DMG400027126 I 0.000
PGSC0003DMG400020344 Solanum tuberosum PGSC0003DMG400020344 I 0.000
PGSC0003DMG400019129 Solanum tuberosum PGSC0003DMG400019129 I 0.000
MTR_7g067080 Medicago truncatula MTR_7g067080 I 0.000
MTR_5g069710 Medicago truncatula MTR_5g069710 I 0.000
GLYMA18G42530 Glycine max GLYMA18G42530 I 0.000
POPTR_0010s20040 Populus trichocarpa POPTR_0010s20040 I 0.000
GLYMA07G17660 Glycine max GLYMA07G17660 I 0.000
GLYMA03G14440 Glycine max GLYMA03G14440 I 0.000
GLYMA01G27720 Glycine max GLYMA01G27720 I 0.000
fgenesh2_kg.4__1876__AT2G38090.1 Arabidopsis lyrata fgenesh2_kg.4__1876__AT2G38090.1 I 0.000
Bra017138 Brassica rapa Bra017138 I 0.000
Bra005139 Brassica rapa Bra005139 I 0.000
Bra000038 Brassica rapa Bra000038 I 0.000
Bo4g187390 Brassica oleracea Bo4g187390 I 0.000
Bo4g029810 Brassica oleracea Bo4g029810 I 0.000
Bo3g032160 Brassica oleracea Bo3g032160 I 0.000
VIT_08s0007g01920 Vitis vinifera VIT_08s0007g01920 I 0.000
28288.m000014 Ricinus communis 28288.m000014 I 0.000
Pm018878 Prunus mume Pm018878 I 0.000
Pm002536 Prunus mume Pm002536 I 0.000
Pm000529 Prunus mume Pm000529 I 0.000
Cla018399 Citrullus lanatus Cla018399 I 0.000
Cla018243 Citrullus lanatus Cla018243 I 0.000
Cla013553 Citrullus lanatus Cla013553 I 0.000
Cla004397 Citrullus lanatus Cla004397 I 0.000
Ca_19327 Cicer arietinum Ca_19327 I 0.000
VIT_13s0019g03370 Vitis vinifera VIT_13s0019g03370 I 0.000
29681.m001296 Ricinus communis 29681.m001296 I 0.000
VIT_06s0004g06100 Vitis vinifera VIT_06s0004g06100 I 0.000
TCM_041672 Theobroma cacao TCM_041672 I 0.000
TCM_021750 Theobroma cacao TCM_021750 I 0.000
Solyc10g076820.1 Solanum lycopersicum Solyc10g076820.1 I 0.000
Solyc09g014250.2 Solanum lycopersicum Solyc09g014250.2 I 0.000
Solyc06g076770.2 Solanum lycopersicum Solyc06g076770.2 I 0.000
Solyc05g052610.2 Solanum lycopersicum Solyc05g052610.2 I 0.000
PRUPE_ppa018139mg Prunus persica PRUPE_ppa018139mg I 0.000
PRUPE_ppa009103mg Prunus persica PRUPE_ppa009103mg I 0.000
POPTR_0016s11980 Populus trichocarpa POPTR_0016s11980 I 0.000