Cagra.2515s0014 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.2515s0014 T286093_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.840 0.882
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.805 0.860
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.713 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2515s0014.1.p Myb 49 95
Cagra.2515s0014.1.p Myb 101 146

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EOMES Homo sapiens ENSG00000163508 D 0.000
EOMES Callithrix jacchus ENSCJAG00000004263 I 0.000
TBX2 Gorilla gorilla ENSGGOG00000009144 I 0.000
TBX20 Sorex araneus ENSSARG00000003223 I 0.000
Cmyd_10011686 Chelonia mydas Cmyd_10011686 N 0.000
SPU_018392 Strongylocentrotus purpuratus SPU_018392 N 0.000
Myotis_brandtii_Eomes_10021705 Myotis brandtii Myotis_brandtii_Eomes_10021705 N 0.000
Ogr12599 Ophisaurus gracilis Ogr12599 N 0.000
Pvit_13952 Pogona vitticeps Pvit_13952 N 0.000
AALB000413 Anopheles albimanus AALB000413 N 0.000
AARA011017 Anopheles arabiensis AARA011017 N 0.000
AATE008052 Anopheles atroparvus AATE008052 N 0.000
ADIR010887 Anopheles dirus ADIR010887 N 0.000
AFAF020317 Anopheles farauti AFAF020317 N 0.000
AMIN000995 Anopheles minimus AMIN000995 N 0.000
ASTEI05183 Anopheles stephensi ASTEI05183 N 0.000
ANCCAN_19748 Ancylostoma caninum ANCCAN_19748 N 0.000
ASIM_0000148501 Anisakis simplex ASIM_0000148501 N 0.000
ASIM_0001646101 Anisakis simplex ASIM_0001646101 N 0.000
D918_04293 Trichuris suis D918_04293 N 0.000
DICVIV_06158 Dictyocaulus viviparus DICVIV_06158 N 0.000
EEL_0000193401 Elaeophora elaphi EEL_0000193401 N 0.000
OFLC_0000512101 Onchocerca flexuosa OFLC_0000512101 N 0.000
SBAD_0000643401 Soboliphyme baturini SBAD_0000643401 N 0.000
scaffold432-EXSNAP2012.9 Pristionchus exspectatus scaffold432-EXSNAP2012.9 N 0.000
SMUV_0000328301 Syphacia muris SMUV_0000328301 N 0.000
ENSTNIG00000016870 Tetraodon nigroviridis ENSTNIG00000016870 N 0.000
AAEL014429 Aedes aegypti AAEL014429 N 0.000
TBX21 Erinaceus europaeus ENSEEUG00000008994 N 0.000
TBX15 Echinops telfairi ENSETEG00000017969 N 0.000
tbx21 Gasterosteus aculeatus ENSGACG00000003829 N 0.000
ENSGMOG00000001960 Gadus morhua ENSGMOG00000001960 N 0.000
ENSMGAG00000006532 Meleagris gallopavo ENSMGAG00000006532 N 0.000
ENSOANG00000012287 Ornithorhynchus anatinus ENSOANG00000012287 N 0.000
tbx21 Oryzias latipes ENSORLG00000012193 N 0.000
ENSPFOG00000021683 Poecilia formosa ENSPFOG00000021683 N 0.000
ENSTGUG00000003557 Taeniopygia guttata ENSTGUG00000003557 N 0.000
Alligator_sinensis_CCG006942.1 Alligator sinensis Alligator_sinensis_CCG006942.1 N 0.000
ENSTSYG00000009935 Tarsius syrichta ENSTSYG00000009935 N 0.000
HMEL012427 Heliconius melpomene HMEL012427 N 0.000
KGM_02028 Danaus plexippus KGM_02028 N 0.000
KGM_02040 Danaus plexippus KGM_02040 N 0.000
PHUM147760 Pediculus humanus PHUM147760 N 0.000
PHUM147770 Pediculus humanus PHUM147770 N 0.000
PPA25262 Pristionchus pacificus PPA25262 N 0.000
RPRC009188 Rhodnius prolixus RPRC009188 N 0.000
AAEL013855 Aedes aegypti AAEL013855 N 0.000
TC013513 Tribolium castaneum TC013513 N 0.000