evm.TU.contig_42663.2 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.contig_42663.2 T287022_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.703 0.795
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_42663.2 Myb 9 56
evm.TU.contig_42663.2 Myb 62 102

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB113 Arabidopsis thaliana AT1G66370 D 0.703
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.668
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I 0.698
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.725
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I 0.671
mgf019317m Mimulus guttatus mgf019317m I 0.676
27763.m000042 Ricinus communis 27763.m000042 I 0.693
Pm029445 Prunus mume Pm029445 I 0.712
Pm029442 Prunus mume Pm029442 I 0.675
Pm029440 Prunus mume Pm029440 I 0.670
Ca_22078 Cicer arietinum Ca_22078 I 0.661
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.693
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I 0.668
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.712
VIT_02s0033g00430 Vitis vinifera VIT_02s0033g00430 I 0.668
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.712
PK17827.1 Cannabis sativa PK17827.1 I 0.698
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.722
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.708
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.724
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.738
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.724
Carubv10020888m.g Capsella rubella Carubv10020888m.g I 0.690
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.702
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I 0.809
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.809
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.705
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.705
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.668
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.741
PK05760.1 Cannabis sativa PK05760.1 I 0.723
MYB75 Arabidopsis thaliana AT1G56650 I 0.724
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.665
MYB114 Arabidopsis thaliana AT1G66380 I 0.741
MYB90 Arabidopsis thaliana AT1G66390 I 0.725
Bo00835s060 Brassica oleracea Bo00835s060 I 0.730
Bo6g099880 Brassica oleracea Bo6g099880 I 0.741
Bo6g100940 Brassica oleracea Bo6g100940 I 0.741
Bra001917 Brassica rapa Bra001917 I 0.751
Bra004162 Brassica rapa Bra004162 I 0.744
Bra039763 Brassica rapa Bra039763 I 0.730
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I 0.700
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.741
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.728
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.670
GLYMA09G37010 Glycine max GLYMA09G37010 I 0.676
GLYMA18G49690 Glycine max GLYMA18G49690 I 0.679
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.661
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I 0.699
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.664
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.674
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.677
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.681
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.664
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.676
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I 0.667
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.735
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.725
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.693
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.693
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.693
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.697
TCM_019192 Theobroma cacao TCM_019192 I 0.705