gene05559-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene05559-v1.0-hybrid T287247_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna05559.1-v1.0-hybrid Myb 279 324

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava20168.m1 Manihot esculenta cassava20168.m1 N 0.761
chr2.CM0177.470.nc Lotus japonicus chr2.CM0177.470.nc N 0.728
SapurV1A.0493s0270 Salix purpurea SapurV1A.0493s0270 N 0.680
orange1.1g037355m.g Citrus sinensis orange1.1g037355m.g N 0.784
MDP0000312273 Malus domestica MDP0000312273 N 0.714
Lus10039632.g Linum usitatissimum Lus10039632.g N 0.677
Lus10002159.g Linum usitatissimum Lus10002159.g N 0.749
Gorai.007G058000 Gossypium raimondii Gorai.007G058000 N 0.795
Gorai.003G035800 Gossypium raimondii Gorai.003G035800 N 0.732
evm.TU.supercontig_129.20 Carica papaya evm.TU.supercontig_129.20 N 0.700
Ciclev10026033m.g Citrus clementina Ciclev10026033m.g N 0.784
Cucsa.103750 Cucumis sativus Cucsa.103750 N 0.710
cassava44568.m1 Manihot esculenta cassava44568.m1 N 0.795
AMTR_s00044p00144500 Amborella trichopoda AMTR_s00044p00144500 N 0.681
28179.m000458 Ricinus communis 28179.m000458 N 0.753
Pm002284 Prunus mume Pm002284 N 0.745
Cla014299 Citrullus lanatus Cla014299 N 0.759
VIT_17s0000g03540 Vitis vinifera VIT_17s0000g03540 N 0.809
TCM_000914 Theobroma cacao TCM_000914 N 0.799
Solyc01g068540.2 Solanum lycopersicum Solyc01g068540.2 N 0.661
PRUPE_ppa003947mg Prunus persica PRUPE_ppa003947mg N 0.745
POPTR_0018s04230 Populus trichocarpa POPTR_0018s04230 N 0.736
PGSC0003DMG400000839 Solanum tuberosum PGSC0003DMG400000839 N 0.661
MTR_7g076850 Medicago truncatula MTR_7g076850 N 0.709
GLYMA09G33600 Glycine max GLYMA09G33600 N 0.728
GLYMA01G02380 Glycine max GLYMA01G02380 N 0.728