CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.007G373500
(
Gossypium raimondii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Gorai.007G373500
T287657_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.007G373500.1
Myb
349
399
QKMWTLMEVIKLVDGIAKYGVGRWTNIKKLLFASSTYRTPVDLRDKWRNLL
Gorai.007G373500.2
Myb
349
399
QKMWTLMEVIKLVDGIAKYGVGRWTNIKKLLFASSTYRTPVDLRDKWRNLL
Gorai.007G373500.3
Myb
324
374
QKMWTLMEVIKLVDGIAKYGVGRWTNIKKLLFASSTYRTPVDLRDKWRNLL
Gorai.007G373500.5
Myb
349
399
QKMWTLMEVIKLVDGIAKYGVGRWTNIKKLLFASSTYRTPVDLRDKWRNLL
Links
Other
Myb/SANT
family TFs
Other
Gossypium raimondii
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA10G06560
Glycine max
GLYMA10G06560
N
0.764
GLYMA13G20760
Glycine max
GLYMA13G20760
N
0.764
MTR_1g063940
Medicago truncatula
MTR_1g063940
N
0.680
TCM_022189
Theobroma cacao
TCM_022189
N
0.819
TRFL8
Vitis vinifera
VIT_08s0040g01640
N
0.749
Ca_17147
Cicer arietinum
Ca_17147
N
0.678
30078.m002313
Ricinus communis
30078.m002313
N
0.664
cassava11812.valid.m1
Manihot esculenta
cassava11812.valid.m1
N
0.714
cassava11813.valid.m1
Manihot esculenta
cassava11813.valid.m1
N
0.714
cassava11814.valid.m1
Manihot esculenta
cassava11814.valid.m1
N
0.714
cassava14545.m1
Manihot esculenta
cassava14545.m1
N
0.714
cassava14546.m1
Manihot esculenta
cassava14546.m1
N
0.714
Gorai.002G247800
Gossypium raimondii
Gorai.002G247800
N
0.828
PK07211.1
Cannabis sativa
PK07211.1
N
0.708
CM1729.130.nc
Lotus japonicus
CM1729.130.nc
N
0.694