Lus10003013.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10003013.g T287872_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.784 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10003013 Myb 291 340

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB113 Arabidopsis thaliana AT1G66370 D
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I
Ca_22078 Cicer arietinum Ca_22078 I
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I
Carubv10020888m.g Capsella rubella Carubv10020888m.g I
Carubv10020856m.g Capsella rubella Carubv10020856m.g I
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I
mgf019317m Mimulus guttatus mgf019317m I
Cucsa.277570 Cucumis sativus Cucsa.277570 I
27763.m000042 Ricinus communis 27763.m000042 I
Pm031337 Prunus mume Pm031337 I
Pm029445 Prunus mume Pm029445 I
Pm029442 Prunus mume Pm029442 I
Pm029440 Prunus mume Pm029440 I
Pm025429 Prunus mume Pm025429 I
chr1.LjT44L17.240.nd Lotus japonicus chr1.LjT44L17.240.nd I
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I
MYB75 Arabidopsis thaliana AT1G56650 I
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I
PK17827.1 Cannabis sativa PK17827.1 I
PK05760.1 Cannabis sativa PK05760.1 I
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I
MDP0000192051 Malus domestica MDP0000192051 I
Lus10042522.g Linum usitatissimum Lus10042522.g I
Lus10028514.g Linum usitatissimum Lus10028514.g I
Lus10028513.g Linum usitatissimum Lus10028513.g I
Lus10009130.g Linum usitatissimum Lus10009130.g I
Lus10009129.g Linum usitatissimum Lus10009129.g I
Eucgr.J01576 Eucalyptus grandis Eucgr.J01576 I
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I
evm.TU.contig_42663.2 Carica papaya evm.TU.contig_42663.2 I
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I
Eucgr.J01578 Eucalyptus grandis Eucgr.J01578 I
GLYMA07G16980 Glycine max GLYMA07G16980 I
MTR_5g078950 Medicago truncatula MTR_5g078950 I
MTR_5g078910 Medicago truncatula MTR_5g078910 I
MTR_5g078860 Medicago truncatula MTR_5g078860 I
MTR_5g078800 Medicago truncatula MTR_5g078800 I
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I
GLYMA19G02980 Glycine max GLYMA19G02980 I
GLYMA18G49690 Glycine max GLYMA18G49690 I
GLYMA18G41520 Glycine max GLYMA18G41520 I
GLYMA09G37010 Glycine max GLYMA09G37010 I
GLYMA09G36966 Glycine max GLYMA09G36966 I
MTR_5g079120 Medicago truncatula MTR_5g079120 I
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I
Bra039763 Brassica rapa Bra039763 I
Bra004162 Brassica rapa Bra004162 I
Bra001917 Brassica rapa Bra001917 I
Bo6g100940 Brassica oleracea Bo6g100940 I
Bo6g099880 Brassica oleracea Bo6g099880 I
Bo00835s060 Brassica oleracea Bo00835s060 I
MYB90 Arabidopsis thaliana AT1G66390 I
MYB114 Arabidopsis thaliana AT1G66380 I
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I
TCM_026054 Theobroma cacao TCM_026054 I
TCM_019192 Theobroma cacao TCM_019192 I
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I
Ca_19630 Cicer arietinum Ca_19630 I
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I
PRUPE_ppa020385mg Prunus persica PRUPE_ppa020385mg I
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I
MTR_8g060940 Medicago truncatula MTR_8g060940 I
MTR_5g079290 Medicago truncatula MTR_5g079290 I
MTR_5g079220 Medicago truncatula MTR_5g079220 I