Lus10003277.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10003277.g T287873_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.679 0.764
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10003277 Myb 3 50
Lus10003277 Myb 56 97

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB113 Arabidopsis thaliana AT1G66370 D 0.679
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.668
chr1.LjT44L17.240.nd Lotus japonicus chr1.LjT44L17.240.nd I 0.782
Ca_19630 Cicer arietinum Ca_19630 I 0.774
Pm029440 Prunus mume Pm029440 I 0.690
Pm029442 Prunus mume Pm029442 I 0.693
Pm029445 Prunus mume Pm029445 I 0.693
27763.m000042 Ricinus communis 27763.m000042 I 0.711
Cucsa.277570 Cucumis sativus Cucsa.277570 I 0.741
mgf019317m Mimulus guttatus mgf019317m I 0.695
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.703
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.663
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.662
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.682
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.700
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.682
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.706
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.797
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I 0.701
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I 0.664
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.717
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.717
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I 0.753
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.759
Lus10009130.g Linum usitatissimum Lus10009130.g I 0.663
Lus10028513.g Linum usitatissimum Lus10028513.g I 0.663
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.799
MDP0000192051 Malus domestica MDP0000192051 I 0.716
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.700
PK05760.1 Cannabis sativa PK05760.1 I 0.688
MYB75 Arabidopsis thaliana AT1G56650 I 0.696
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.677
MYB114 Arabidopsis thaliana AT1G66380 I 0.700
MYB90 Arabidopsis thaliana AT1G66390 I 0.700
Bo00835s060 Brassica oleracea Bo00835s060 I 0.689
Bo6g099880 Brassica oleracea Bo6g099880 I 0.700
Bo6g100940 Brassica oleracea Bo6g100940 I 0.703
Bra001917 Brassica rapa Bra001917 I 0.689
Bra004162 Brassica rapa Bra004162 I 0.700
Bra039763 Brassica rapa Bra039763 I 0.689
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.696
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.666
GLYMA07G16980 Glycine max GLYMA07G16980 I 0.773
GLYMA18G41520 Glycine max GLYMA18G41520 I 0.777
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I 0.774
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.664
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.681
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.661
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.668
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.670
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I 0.720
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.688
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.694
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.700
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.691
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.681
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.698
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.701
TCM_019192 Theobroma cacao TCM_019192 I 0.717
TCM_026054 Theobroma cacao TCM_026054 I 0.808
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.681