Lus10027197.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10027197.g T288088_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21166.1
M01281_2.00 		Cannabis sativa
HACCWAMY
RKTWGGTD		 PBM
Lambert et al.(2019)
pTH11255 		0.782 0.839
MYB99
M07151_2.00 		Arabidopsis thaliana
NYYYACCWAMYHH
DDRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB99_col_a 		0.723 0.785
MYB99
M07152_2.00 		Arabidopsis thaliana
YHYACCTAMYH
DRKTAGGTRDR		 Dap-seq
OMalley et al.(2016)
MYB99_colamp_a 		0.723 0.785
MYB43
M07127_2.00 		Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB43_col_a 		0.721 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10027197 Myb 14 61
Lus10027197 Myb 67 112

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART02G37080 Oryza barthii OBART02G37080 N
OMERI02G34900 Oryza meridionalis OMERI02G34900 N
OPUNC02G34240 Oryza punctata OPUNC02G34240 N
Sb04g036955 Sorghum bicolor Sb04g036955 N
Pavir.Aa00126 Panicum virgatum Pavir.Aa00126 N