MDP0000478453 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000478453 T288628_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.701 0.808
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000478453 Myb 8 42
MDP0000478453 Myb 48 86

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB113 Arabidopsis thaliana AT1G66370 D 0.701
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.685
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.665
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.694
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.699
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.694
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.672
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.680
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.699
mgf019317m Mimulus guttatus mgf019317m I 0.678
27763.m000042 Ricinus communis 27763.m000042 I 0.687
Pm029445 Prunus mume Pm029445 I 0.739
Pm029442 Prunus mume Pm029442 I 0.726
Pm029440 Prunus mume Pm029440 I 0.724
Ca_22078 Cicer arietinum Ca_22078 I 0.666
Ca_19630 Cicer arietinum Ca_19630 I 0.671
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.680
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.665
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I 0.688
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.701
MYB75 Arabidopsis thaliana AT1G56650 I 0.696
PK17827.1 Cannabis sativa PK17827.1 I 0.693
PK05760.1 Cannabis sativa PK05760.1 I 0.685
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.696
MDP0000192051 Malus domestica MDP0000192051 I 0.695
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.687
Lus10028514.g Linum usitatissimum Lus10028514.g I 0.671
Lus10009129.g Linum usitatissimum Lus10009129.g I 0.671
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.701
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I 0.691
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.703
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.703
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I 0.698
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I 0.662
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.678
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I 0.678
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.696
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.679
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I 0.671
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.662
GLYMA18G49690 Glycine max GLYMA18G49690 I 0.675
GLYMA18G41520 Glycine max GLYMA18G41520 I 0.674
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.688
GLYMA07G16980 Glycine max GLYMA07G16980 I 0.674
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.678
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.663
Bra039763 Brassica rapa Bra039763 I 0.686
Bra004162 Brassica rapa Bra004162 I 0.696
Bra001917 Brassica rapa Bra001917 I 0.686
Bo6g100940 Brassica oleracea Bo6g100940 I 0.699
Bo6g099880 Brassica oleracea Bo6g099880 I 0.696
Bo00835s060 Brassica oleracea Bo00835s060 I 0.686
MYB90 Arabidopsis thaliana AT1G66390 I 0.696
MYB114 Arabidopsis thaliana AT1G66380 I 0.696
PRUPE_ppa020385mg Prunus persica PRUPE_ppa020385mg I 0.665
TCM_019192 Theobroma cacao TCM_019192 I 0.732
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.716
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.716
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.716
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.706
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.696
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.691
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.718
TCM_026054 Theobroma cacao TCM_026054 I 0.681
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I 0.677
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I 0.684
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.729
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.677
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.671
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.662
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.689