orange1.1g000147m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g000147m.g T288757_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g000147m Myb 1113 1163
orange1.1g000148m Myb 1113 1163
orange1.1g000154m Myb 1113 1163
orange1.1g000164m Myb 1113 1163

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.078210 Cucumis sativus Cucsa.078210 N 0.847
Eucgr.K02162 Eucalyptus grandis Eucgr.K02162 N 0.767
Eucgr.H00795 Eucalyptus grandis Eucgr.H00795 N 0.833
Ciclev10018446m.g Citrus clementina Ciclev10018446m.g N 0.909
Carubv10016123m.g Capsella rubella Carubv10016123m.g N 0.755
Carubv10015863m.g Capsella rubella Carubv10015863m.g N 0.808
Bostr.2021s0055 Boechera stricta Bostr.2021s0055 N 0.780
Bostr.19424s0133 Boechera stricta Bostr.19424s0133 N 0.855
fgenesh1_pg.scaffold_6000180 Physcomitrella patens fgenesh1_pg.scaffold_6000180 N 0.696
estExt_fgenesh1_pg.C_2890011 Physcomitrella patens estExt_fgenesh1_pg.C_2890011 N 0.689
evm.TU.supercontig_8.144 Carica papaya evm.TU.supercontig_8.144 N 0.818
cassava349.valid.m1 Manihot esculenta cassava349.valid.m1 N 0.858
30204.m001750 Ricinus communis 30204.m001750 N 0.805
Pm020347 Prunus mume Pm020347 N 0.835
Cla015187 Citrullus lanatus Cla015187 N 0.847
VIT_07s0005g06680 Vitis vinifera VIT_07s0005g06680 N 0.735
TRIUR3_27363 Triticum urartu TRIUR3_27363 N 0.674
Traes_3DL_FC1A52B36 Triticum aestivum Traes_3DL_FC1A52B36 N 0.667
Traes_3AL_06889C77D Triticum aestivum Traes_3AL_06889C77D N 0.667
MDP0000250529 Malus domestica MDP0000250529 N 0.858
PDK_20s1355591g002 Phoenix dactylifera PDK_20s1355591g002 N 0.738
chr1.LjT36F23.70.nd Lotus japonicus chr1.LjT36F23.70.nd N 0.837
PK23540.1 Cannabis sativa PK23540.1 N 0.858
Thhalv10002368m.g Eutrema salsugineum Thhalv10002368m.g N 0.833
SapurV1A.0342s0100 Salix purpurea SapurV1A.0342s0100 N 0.858
SapurV1A.0135s0340 Salix purpurea SapurV1A.0135s0340 N 0.837
Pavir.J18859 Panicum virgatum Pavir.J18859 N 0.689
TCM_002924 Theobroma cacao TCM_002924 N 0.826
MDP0000155726 Malus domestica MDP0000155726 N 0.858
Lus10022788.g Linum usitatissimum Lus10022788.g N 0.825
Lus10011850.g Linum usitatissimum Lus10011850.g N 0.825
Gorai.007G155000 Gossypium raimondii Gorai.007G155000 N 0.858
Gorai.004G226000 Gossypium raimondii Gorai.004G226000 N 0.845
Gorai.001G233800 Gossypium raimondii Gorai.001G233800 N 0.732
Gorai.001G187100 Gossypium raimondii Gorai.001G187100 N 0.827
gene17608-v1.0-hybrid Fragaria vesca gene17608-v1.0-hybrid N 0.858
Bra032689 Brassica rapa Bra032689 N 0.712
GSMUA_Achr1G21080_001 Musa acuminata GSMUA_Achr1G21080_001 N 0.791
GSMUA_Achr11G13340_001 Musa acuminata GSMUA_Achr11G13340_001 N 0.739
GLYMA18G36628 Glycine max GLYMA18G36628 N 0.848
GLYMA16G14060 Glycine max GLYMA16G14060 N 0.805
GLYMA08G46710 Glycine max GLYMA08G46710 N 0.858
GLYMA03G18725 Glycine max GLYMA03G18725 N 0.805
fgenesh2_kg.3__2706__AT3G24880.1 Arabidopsis lyrata fgenesh2_kg.3__2706__AT3G24880.1 N 0.855
F775_03250 Aegilops tauschii F775_03250 N 0.674
BRADI2G41720 Brachypodium distachyon BRADI2G41720 N 0.674
LPERR11G18970 Leersia perrieri LPERR11G18970 N 0.674
Bra013238 Brassica rapa Bra013238 N 0.801
Bo7g031610 Brassica oleracea Bo7g031610 N 0.793
Bo4g133290 Brassica oleracea Bo4g133290 N 0.712
Bo3g083740 Brassica oleracea Bo3g083740 N 0.801
BGIOSGA027556 Oryza indica BGIOSGA027556 N 0.667
EAF1A Arabidopsis thaliana AT3G24880 N 0.833
EAF1B Arabidopsis thaliana AT3G24870 N 0.833
AMTR_s00045p00026940 Amborella trichopoda AMTR_s00045p00026940 N 0.750
ORUFI08G05170 Oryza rufipogon ORUFI08G05170 N 0.667
Solyc09g060080.2 Solanum lycopersicum Solyc09g060080.2 N 0.786
Solyc06g083420.1 Solanum lycopersicum Solyc06g083420.1 N 0.814
Si000015m.g Setaria italica Si000015m.g N 0.689
Sb03g025920 Sorghum bicolor Sb03g025920 N 0.689
PRUPE_ppa000065mg Prunus persica PRUPE_ppa000065mg N 0.835
POPTR_0014s19020 Populus trichocarpa POPTR_0014s19020 N 0.845
POPTR_0002s24490 Populus trichocarpa POPTR_0002s24490 N 0.837
OS08G0177300 Oryza sativa OS08G0177300 N 0.667
AMTR_s00029p00248140 Amborella trichopoda AMTR_s00029p00248140 N 0.742
OPUNC08G04510 Oryza punctata OPUNC08G04510 N 0.667
ONIVA08G04510 Oryza nivara ONIVA08G04510 N 0.667
OMERI08G04670 Oryza meridionalis OMERI08G04670 N 0.667
OLONG_015531 Oryza longistaminata OLONG_015531 N 0.667
OGLUM08G04910 Oryza glumaepatula OGLUM08G04910 N 0.667
OBART08G04660 Oryza barthii OBART08G04660 N 0.667
OB01G30180 Oryza brachyantha OB01G30180 N 0.667
MTR_7g056603 Medicago truncatula MTR_7g056603 N 0.826