orange1.1g020303m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g020303m.g T288818_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK26523.1
M01283_2.00 		Cannabis sativa
NWHATTCYNN
NNRGAATDWN		 PBM
Lambert et al.(2019)
pTH11304 		0.772 0.809
AT2G40260
M07057_2.00 		Arabidopsis thaliana
HHWDWAHATTCYHTN
NADRGAATDTWHWDD		 Dap-seq
OMalley et al.(2016)
AT2G40260_col_a 		0.766 0.809
AT2G40260
M07058_2.00 		Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT
ADRGAATDTWHHNDDWHHNN		 Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a 		0.766 0.809
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.737 0.872
AT2G38300
M07056_2.00 		Arabidopsis thaliana
WAHATTCYHTH
DADRGAATDTW		 Dap-seq
OMalley et al.(2016)
AT2G38300_col_a 		0.695 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g020303m Myb 20 71

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

456 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
bcl-11 Caenorhabditis elegans WBGene00017430 D
RSKR_0000889800 Rhabditophanes kr3021 RSKR_0000889800 I
HPLM_0001331501 Haemonchus placei HPLM_0001331501 I
L596_g14520 Steinernema carpocapsae L596_g14520 I
L889_g19350 Steinernema feltiae L889_g19350 I
L892_g10848 Steinernema scapterisci L892_g10848 I
L898_g13372 Steinernema monticolum L898_g13372 I
MhA1_Contig454.frz3.fgene1 Meloidogyne hapla MhA1_Contig454.frz3.fgene1 I
nAv.1.0.1.g03797 Acanthocheilonema viteae nAv.1.0.1.g03797 I
nDi.2.2.2.g00707 Dirofilaria immitis nDi.2.2.2.g00707 I
NECAME_02245 Necator americanus NECAME_02245 I
nLs.2.1.2.g09142 Litomosoides sigmodontis nLs.2.1.2.g09142 I
OFLC_0000354401 Onchocerca flexuosa OFLC_0000354401 I
PTRK_0001160400 Parastrongyloides trichosuri PTRK_0001160400 I
HCOI00904800 Haemonchus contortus HCOI00904800 I
SBAD_0000338201 Soboliphyme baturini SBAD_0000338201 I
scaffold248-EXSNAP2012.2 Pristionchus exspectatus scaffold248-EXSNAP2012.2 I
SMUV_0000624601 Syphacia muris SMUV_0000624601 I
SPAL_0001358300 Strongyloides papillosus SPAL_0001358300 I
SSTP_0000584500 Strongyloides stercoralis SSTP_0000584500 I
SVE_0953600 Strongyloides venezuelensis SVE_0953600 I
TCNE_0001279201 Toxocara canis TCNE_0001279201 I
TELCIR_04334 Teladorsagia circumcincta TELCIR_04334 I
TELCIR_24378 Teladorsagia circumcincta TELCIR_24378 I
TMUE_s0041001100 Trichuris muris TMUE_s0041001100 I
ANCCEY_05532 Ancylostoma ceylanicum ANCCEY_05532 I
Bm3354 Brugia malayi Bm3354 I
CBG18919 Caenorhabditis briggsae CBG18919 I
CBN13459 Caenorhabditis brenneri CBN13459 I
CJA41396 Caenorhabditis japonica CJA41396 I
CRE30875 Caenorhabditis remanei CRE30875 I
EFV59674 Trichinella spiralis EFV59674 I
LOAG_18740 Loa loa LOAG_18740 I
PPA20237 Pristionchus pacificus PPA20237 I
WBGene00244008 Onchocerca volvulus WBGene00244008 I
Minc07594 Meloidogyne incognita Minc07594 I
ANCCAN_24528 Ancylostoma caninum ANCCAN_24528 I
HCOI01698200 Haemonchus contortus HCOI01698200 I
ANCDUO_15498 Ancylostoma duodenale ANCDUO_15498 I
ASIM_0001463201 Anisakis simplex ASIM_0001463201 I
ASU_10535 Ascaris suum ASU_10535 I
BXY_0383300 Bursaphelenchus xylophilus BXY_0383300 I
D917_09068 Trichinella nativa D917_09068 I
D918_08675 Trichuris suis D918_08675 I
DICVIV_00143 Dictyocaulus viviparus DICVIV_00143 I
DME_0000006201 Dracunculus medinensis DME_0000006201 I
EVEC_0001125701 Enterobius vermicularis EVEC_0001125701 I
GPLIN_001288500 Globodera pallida GPLIN_001288500 I
WUBG_02612 Wuchereria bancrofti WUBG_02612 I