Pavir.Ea02676 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ea02676 T289136_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea02676.1.p Myb 14 62
Pavir.Ea02676.1.p Myb 68 113

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si000845m.g Setaria italica Si000845m.g I
GSMUA_Achr7G27600_001 Musa acuminata GSMUA_Achr7G27600_001 I
GSMUA_Achr9G18080_001 Musa acuminata GSMUA_Achr9G18080_001 I
LPERR01G24170 Leersia perrieri LPERR01G24170 I
LPERR04G17400 Leersia perrieri LPERR04G17400 I
MLOC_70409 Hordeum vulgare MLOC_70409 I
TRAES3BF036800040CFD_g Triticum aestivum TRAES3BF036800040CFD_g I
TCM_037645 Theobroma cacao TCM_037645 I
Si012401m.g Setaria italica Si012401m.g I
Si004795m.g Setaria italica Si004795m.g I
OBART01G28080 Oryza barthii OBART01G28080 I
TRAES3BF058400020CFD_g Triticum aestivum TRAES3BF058400020CFD_g I
Sb06g025060 Sorghum bicolor Sb06g025060 I
Sb06g025040 Sorghum bicolor Sb06g025040 I
OGLUM01G32030 Oryza glumaepatula OGLUM01G32030 I
Sb03g032420 Sorghum bicolor Sb03g032420 I
OS01G0705700 Oryza sativa OS01G0705700 I
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I
ORUFI01G31210 Oryza rufipogon ORUFI01G31210 I
ONIVA01G32020 Oryza nivara ONIVA01G32020 I
OPUNC01G27950 Oryza punctata OPUNC01G27950 I
ORGLA01G0232100 Oryza glaberrima ORGLA01G0232100 I
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I
PDK_20s1464821g001 Phoenix dactylifera PDK_20s1464821g001 I
Pavir.J39604 Panicum virgatum Pavir.J39604 I
BGIOSGA004292 Oryza indica BGIOSGA004292 I
Pavir.J12952 Panicum virgatum Pavir.J12952 I
BRADI2G47730 Brachypodium distachyon BRADI2G47730 I
cassava8594.m1 Manihot esculenta cassava8594.m1 I
F775_11347 Aegilops tauschii F775_11347 I
F775_14190 Aegilops tauschii F775_14190 I
estExt_fgenesh1_pg.C_420092 Physcomitrella patens estExt_fgenesh1_pg.C_420092 I
GLYMA03G30940 Glycine max GLYMA03G30940 I
GRMZM2G159937 Zea mays GRMZM2G159937 I
GSMUA_Achr4G03160_001 Musa acuminata GSMUA_Achr4G03160_001 I
estExt_fgenesh1_pg.C_310143 Physcomitrella patens estExt_fgenesh1_pg.C_310143 I
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I
GSMUA_Achr3G26180_001 Musa acuminata GSMUA_Achr3G26180_001 I
GSMUA_Achr3G10120_001 Musa acuminata GSMUA_Achr3G10120_001 I
GRMZM2G172795 Zea mays GRMZM2G172795 I
Pavir.Gb01093 Panicum virgatum Pavir.Gb01093 N
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N
TRIUR3_35186 Triticum urartu TRIUR3_35186 N
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N
Pavir.J34298 Panicum virgatum Pavir.J34298 N
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N
TRIUR3_26157 Triticum urartu TRIUR3_26157 N
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N
OS04G0557200 Oryza sativa OS04G0557200 N
OS04G0557800 Oryza sativa OS04G0557800 N
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N
Sb06g025020 Sorghum bicolor Sb06g025020 N
TRIUR3_18279 Triticum urartu TRIUR3_18279 N
OMERI01G18860 Oryza meridionalis OMERI01G18860 N
Traes_2DL_099D4CA9B Triticum aestivum Traes_2DL_099D4CA9B N
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N
GRMZM5G822829 Zea mays GRMZM5G822829 N
OB04G28380 Oryza brachyantha OB04G28380 N
OB04G28350 Oryza brachyantha OB04G28350 N
OB02G27530 Oryza brachyantha OB02G27530 N
OB01G30110 Oryza brachyantha OB01G30110 N
MLOC_38470 Hordeum vulgare MLOC_38470 N
LPERR08G11070 Leersia perrieri LPERR08G11070 N
LPERR04G17390 Leersia perrieri LPERR04G17390 N
LPERR04G17380 Leersia perrieri LPERR04G17380 N
GSMUA_Achr5G20600_001 Musa acuminata GSMUA_Achr5G20600_001 N
OB04G28390 Oryza brachyantha OB04G28390 N
F775_19744 Aegilops tauschii F775_19744 N
F775_10624 Aegilops tauschii F775_10624 N
BGIOSGA015472 Oryza indica BGIOSGA015472 N
BGIOSGA014567 Oryza indica BGIOSGA014567 N
BGIOSGA014566 Oryza indica BGIOSGA014566 N
BGIOSGA014565 Oryza indica BGIOSGA014565 N
BGIOSGA003821 Oryza indica BGIOSGA003821 N
BGIOSGA003819 Oryza indica BGIOSGA003819 N
OLONG_016960 Oryza longistaminata OLONG_016960 N
OPUNC04G19030 Oryza punctata OPUNC04G19030 N
ONIVA04G19860 Oryza nivara ONIVA04G19860 N
ONIVA04G19650 Oryza nivara ONIVA04G19650 N
ONIVA01G22980 Oryza nivara ONIVA01G22980 N
ONIVA01G22920 Oryza nivara ONIVA01G22920 N
OMERI04G17820 Oryza meridionalis OMERI04G17820 N
OMERI04G17790 Oryza meridionalis OMERI04G17790 N
OMERI01G18770 Oryza meridionalis OMERI01G18770 N
OPUNC04G19040 Oryza punctata OPUNC04G19040 N
OLONG_016958 Oryza longistaminata OLONG_016958 N
OLONG_009946 Oryza longistaminata OLONG_009946 N
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N
OBART04G21370 Oryza barthii OBART04G21370 N
OBART04G21320 Oryza barthii OBART04G21320 N
OBART01G20350 Oryza barthii OBART01G20350 N