Thhalv10008152m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10008152m.g T289993_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB51
M07010_2.00 		Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW
WRGTWGGTRRRNNNDNDDNDN		 Dap-seq
OMalley et al.(2016)
MYB51_col_a 		0.906 0.978
MYB3
M02288_2.00 		Arabidopsis thaliana
NNYACCTACCN
NGGTAGGTRNN		 PBM
Weirauch et al.(2014)
pTH7125 		0.684 0.742
MYB4
M02303_2.00 		Arabidopsis thaliana
YACCWACY
RGTWGGTR		 PBM
Weirauch et al.(2014)
pTH7075 		0.674 0.731
MYB4
M07115_2.00 		Arabidopsis thaliana
NYYACCWAMHWHNDD
HHNDWDKTWGGTRRN		 Dap-seq
OMalley et al.(2016)
MYB4_col200_a 		0.674 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10008152m Myb 15 62
Thhalv10008152m Myb 68 113

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

289 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TsM_000185900 Taenia solium TsM_000185900 I 0.000
HNAJ_0000187001 Hymenolepis nana HNAJ_0000187001 I 0.000
HmN_000875600 Hymenolepis microstoma HmN_000875600 I 0.000
HDID_0000845501 Hymenolepis diminuta HDID_0000845501 I 0.000
T265_06415 Opisthorchis viverrini T265_06415 I 0.000
EmuJ_000660100 Echinococcus multilocularis EmuJ_000660100 I 0.000
TASK_0000605401 Taenia asiatica TASK_0000605401 I 0.000
ECANG7_05018 Echinococcus canadensis ECANG7_05018 I 0.000
DILT_0000300801 Diphyllobothrium latum DILT_0000300801 I 0.000
csin105476 Clonorchis sinensis csin105476 I 0.000
A_01406 Schistosoma haematobium A_01406 I 0.000
Hsal_04799--XP_623740.2_APIME Harpegnathos saltator Hsal_04799--XP_623740.2_APIME I 0.000
Cflo_07076--XP_623740.2_APIME Camponotus floridanus Cflo_07076--XP_623740.2_APIME I 0.000
TTAC_0000110701 Hydatigera taeniaeformis TTAC_0000110701 I 0.000
SINV20866 Solenopsis invicta SINV20866 I 0.000
PHUM083480 Pediculus humanus PHUM083480 I 0.000
MCINX001888 Melitaea cinxia MCINX001888 I 0.000
ACEP22192 Atta cephalotes ACEP22192 I 0.000
GB50277 Apis mellifera GB50277 I 0.000
OFLC_0000364301 Onchocerca flexuosa OFLC_0000364301 N 0.000
TTRE_0000137701 Trichuris trichiura TTRE_0000137701 N 0.000
SBAD_0000372601 Soboliphyme baturini SBAD_0000372601 N 0.000
SMUV_0000600001 Syphacia muris SMUV_0000600001 N 0.000
TMUE_s0025000400 Trichuris muris TMUE_s0025000400 N 0.000
nRc.2.0.1.g07784 Romanomermis culicivorax nRc.2.0.1.g07784 N 0.000
nOo.2.0.1.g09031 Onchocerca ochengi nOo.2.0.1.g09031 N 0.000
nLs.2.1.2.g08818 Litomosoides sigmodontis nLs.2.1.2.g08818 N 0.000
GPUH_0001233401 Gongylonema pulchrum GPUH_0001233401 N 0.000
EVEC_0001343201 Enterobius vermicularis EVEC_0001343201 N 0.000
EEL_0000828301 Elaeophora elaphi EEL_0000828301 N 0.000
D918_08586 Trichuris suis D918_08586 N 0.000
D917_09696 Trichinella nativa D917_09696 N 0.000
WBGene00242350 Onchocerca volvulus WBGene00242350 N 0.000
LOAG_18956 Loa loa LOAG_18956 N 0.000