Contig21598.0.g16 (Oxytricha trifallax)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Contig21598.0.g16 T290220_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.737 0.859
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.737 0.859
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.709 0.848
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Contig21598.0.g16 Myb 7 53
Contig21598.0.g16 Myb 59 103

Links

Other Myb/SANT family TFs
Other Oxytricha trifallax TFs

393 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA021487 Oryza indica BGIOSGA021487 N 0.000
OB06G19370 Oryza brachyantha OB06G19370 N 0.000
OBART06G10160 Oryza barthii OBART06G10160 N 0.000
OGLUM06G11040 Oryza glumaepatula OGLUM06G11040 N 0.000
OMERI06G11830 Oryza meridionalis OMERI06G11830 N 0.000
ONIVA06G11770 Oryza nivara ONIVA06G11770 N 0.000
OPUNC06G09770 Oryza punctata OPUNC06G09770 N 0.000
ORGLA06G0095900 Oryza glaberrima ORGLA06G0095900 N 0.000
ORUFI06G10660 Oryza rufipogon ORUFI06G10660 N 0.000
mgf016587m Mimulus guttatus mgf016587m N 0.000