chr1.CM0141.350.nd (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr1.CM0141.350.nd T290654_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.738 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0141.350.nd Myb 9 56
chr1.CM0141.350.nd Myb 62 107

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_pg.C_4800009 Physcomitrella patens estExt_fgenesh1_pg.C_4800009 D 0.000
SELMODRAFT_73150 Selaginella moellendorffii SELMODRAFT_73150 I 0.000
SELMODRAFT_73157 Selaginella moellendorffii SELMODRAFT_73157 I 0.000
SELMODRAFT_73159 Selaginella moellendorffii SELMODRAFT_73159 I 0.000
gw1.117.121.1 Physcomitrella patens gw1.117.121.1 I 0.000
gw1.14.214.1 Physcomitrella patens gw1.14.214.1 I 0.000
gw1.15.199.1 Physcomitrella patens gw1.15.199.1 I 0.000
gw1.155.87.1 Physcomitrella patens gw1.155.87.1 I 0.000
gw1.276.83.1 Physcomitrella patens gw1.276.83.1 I 0.000
gw1.296.16.1 Physcomitrella patens gw1.296.16.1 I 0.000
SELMODRAFT_73147 Selaginella moellendorffii SELMODRAFT_73147 N 0.000
SELMODRAFT_73148 Selaginella moellendorffii SELMODRAFT_73148 N 0.000