CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NAC1
(
Arabidopsis lyrata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Al_scaffold_0001_4992
T291946_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Al_scaffold_0001_4992
NAC/NAM
20
145
PPGFRFHPKDDELVCDYLMKRSLHNNPRPPLVLIQVDLNKCEPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRAILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis lyrata
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIUR3_29250
Triticum urartu
TRIUR3_29250
I
0.878
Traes_7DL_BDD45DB24
Triticum aestivum
Traes_7DL_BDD45DB24
I
0.878
cassava27052.m1
Manihot esculenta
cassava27052.m1
I
0.944
Sb07g005610
Sorghum bicolor
Sb07g005610
I
0.891
F775_30297
Aegilops tauschii
F775_30297
I
0.878
GRMZM2G063522
Zea mays
GRMZM2G063522
I
0.880
GRMZM2G167018
Zea mays
GRMZM2G167018
I
0.889
Cla023574
Citrullus lanatus
Cla023574
N
0.953
scaffold_301478.1
Arabidopsis lyrata
scaffold_301478.1
N
0.959
29650.m000275
Ricinus communis
29650.m000275
N
0.963
Bostr.3640s0073
Boechera stricta
Bostr.3640s0073
N
0.924
Cagra.6372s0006
Capsella grandiflora
Cagra.6372s0006
N
0.970
Carubv10011081m.g
Capsella rubella
Carubv10011081m.g
N
0.970
Ciclev10021117m.g
Citrus clementina
Ciclev10021117m.g
N
0.970
Eucgr.F01449
Eucalyptus grandis
Eucgr.F01449
N
0.956
gene10469-v1.0-hybrid
Fragaria vesca
gene10469-v1.0-hybrid
N
0.907
MDP0000298182
Malus domestica
MDP0000298182
N
0.924
SapurV1A.0085s0410
Salix purpurea
SapurV1A.0085s0410
N
0.921
SapurV1A.0284s0040
Salix purpurea
SapurV1A.0284s0040
N
0.918
Thhalv10011659m.g
Eutrema salsugineum
Thhalv10011659m.g
N
0.992
Thhalv10021297m.g
Eutrema salsugineum
Thhalv10021297m.g
N
0.965
PK23481.1
Cannabis sativa
PK23481.1
N
0.886
chr3.CM0279.430.nd
Lotus japonicus
chr3.CM0279.430.nd
N
0.928
Ca_13537
Cicer arietinum
Ca_13537
N
0.933
NAC021
Arabidopsis thaliana
AT1G56010
N
0.995
Sb10g027100
Sorghum bicolor
Sb10g027100
N
0.937
PRUPE_ppa008801mg
Prunus persica
PRUPE_ppa008801mg
N
0.916
PGSC0003DMG400022134
Solanum tuberosum
PGSC0003DMG400022134
N
0.967
OPUNC03G00610
Oryza punctata
OPUNC03G00610
N
0.887
MTR_2g064470
Medicago truncatula
MTR_2g064470
N
0.920
GLYMA15G40510
Glycine max
GLYMA15G40510
N
0.919
GLYMA08G18470
Glycine max
GLYMA08G18470
N
0.956
Bra034713
Brassica rapa
Bra034713
N
0.961
Bra030820
Brassica rapa
Bra030820
N
0.992
Bra001480
Brassica rapa
Bra001480
N
0.942
Bo5g132990
Brassica oleracea
Bo5g132990
N
0.958
Bo3g185760
Brassica oleracea
Bo3g185760
N
0.992
Bo3g065240
Brassica oleracea
Bo3g065240
N
0.942
AT3G12977
Arabidopsis thaliana
AT3G12977
N
0.951