CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIOSGA036921
(
Oryza indica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
BGIOSGA036921
T292270_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA036921-PA
NAC/NAM
20
160
PPGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL
BGIOSGA036921-PA
NAC/NAM
168
316
HPNLRLNPKDEWVVCKVFHKKQGDEAINNQQQQPQYAAVDQYSAETPNSGSSVVQAGDIDGGDDFFQLDDIIDPSIYFVSNSSNILSAPPNNNNAVYSVSASTTTTNTTAVSFQQQPNYYSLINKSSSSSSSSSSNYSAPLQQHVSSWN
Links
Other
NAC/NAM
family TFs
Other
Oryza indica
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00009p00103030
Amborella trichopoda
AMTR_s00009p00103030
N
TRFL3
Arabidopsis thaliana
AT1G17460
N
TRFL6
Arabidopsis thaliana
AT1G72650
N
BRADI3G57300
Brachypodium distachyon
BRADI3G57300
N
TRFL3
Arabidopsis lyrata
fgenesh2_kg.1__1907__AT1G17460.1
N
cassava25004.valid.m1
Manihot esculenta
cassava25004.valid.m1
N
Cucsa.360310
Cucumis sativus
Cucsa.360310
N
Bostr.7128s0357
Boechera stricta
Bostr.7128s0357
N
Cagra.0824s0115
Capsella grandiflora
Cagra.0824s0115
N
Carubv10012426m.g
Capsella rubella
Carubv10012426m.g
N
Thhalv10007199m.g
Eutrema salsugineum
Thhalv10007199m.g
N
Thhalv10018282m.g
Eutrema salsugineum
Thhalv10018282m.g
N