CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GRMZM2G031001
(
Zea mays
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GRMZM2G031001
T293191_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC087
M07232_2.00
Arabidopsis thaliana
TDNCKTSHNNNDYACGYHANB
VNTDRCGTRHNNNDSAMGNHA
Dap-seq
OMalley et al.(2016)
ANAC087_colamp_a
0.881
0.763
ANAC087
M07233_2.00
Arabidopsis thaliana
TWNCKTGWNNNDCAMGYHA
TDRCKTGHNNNWCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC087_col_v3a
0.881
0.763
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G031001_P01
NAC/NAM
106
231
PPGFRFHPTDEEIISHYLTHKALDHRFVSGVIGEVDLNRIEPWDLPGRAKMGEKEWYFFCHKDRKYPTGTRTNRATETGYWKATGKDKEIFRGRGVLVGMKKTLVFYRGRAPRGEKTGWVMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Zea mays
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ML09109a
Mnemiopsis leidyi
ML09109a
I
0.000
PPA02656
Pristionchus pacificus
PPA02656
I
0.000
PPA08082
Pristionchus pacificus
PPA08082
I
0.000
scaffold820-EXSNAP2012.6
Pristionchus exspectatus
scaffold820-EXSNAP2012.6
I
0.000
PPA02657
Pristionchus pacificus
PPA02657
N
0.000
PPA14137
Pristionchus pacificus
PPA14137
N
0.000
PPA24122
Pristionchus pacificus
PPA24122
N
0.000
scaffold1221-EXSNAP2012.4
Pristionchus exspectatus
scaffold1221-EXSNAP2012.4
N
0.000
scaffold1684-EXSNAP2012.5
Pristionchus exspectatus
scaffold1684-EXSNAP2012.5
N
0.000
scaffold202-EXSNAP2012.8
Pristionchus exspectatus
scaffold202-EXSNAP2012.8
N
0.000
scaffold2087-EXSNAP2012.2
Pristionchus exspectatus
scaffold2087-EXSNAP2012.2
N
0.000
scaffold604-EXSNAP2012.6
Pristionchus exspectatus
scaffold604-EXSNAP2012.6
N
0.000
scaffold690-EXSNAP2012.5
Pristionchus exspectatus
scaffold690-EXSNAP2012.5
N
0.000
scaffold83-EXSNAP2012.34
Pristionchus exspectatus
scaffold83-EXSNAP2012.34
N
0.000