OGLUM08G25240 (Oryza glumaepatula)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 OGLUM08G25240 T294183_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.890 0.754
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.890 0.754
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM08G25240.1 NAC/NAM 22 148

Links

Other NAC/NAM family TFs
Other Oryza glumaepatula TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I
MLOC_12609 Hordeum vulgare MLOC_12609 I
Lus10005921.g Linum usitatissimum Lus10005921.g N
cassava34339.m1 Manihot esculenta cassava34339.m1 N
cassava39076.m1 Manihot esculenta cassava39076.m1 N
mgf025545m Mimulus guttatus mgf025545m N
Bostr.26833s0978 Boechera stricta Bostr.26833s0978 N
Cagra.0084s0050 Capsella grandiflora Cagra.0084s0050 N
Carubv10028317m.g Capsella rubella Carubv10028317m.g N
gene12898-v1.0-hybrid Fragaria vesca gene12898-v1.0-hybrid N
Gorai.003G121600 Gossypium raimondii Gorai.003G121600 N
Pm019768 Prunus mume Pm019768 N
MDP0000141137 Malus domestica MDP0000141137 N
MDP0000819497 Malus domestica MDP0000819497 N
SapurV1A.0250s0360 Salix purpurea SapurV1A.0250s0360 N
SapurV1A.0498s0250 Salix purpurea SapurV1A.0498s0250 N
Thhalv10015321m.g Eutrema salsugineum Thhalv10015321m.g N
chr1.CM0033.320.nc Lotus japonicus chr1.CM0033.320.nc N
chr1.CM0033.390.nc Lotus japonicus chr1.CM0033.390.nc N
LjSGA_030914.1 Lotus japonicus LjSGA_030914.1 N
MTR_3g091700 Medicago truncatula MTR_3g091700 N
RKD4 Arabidopsis thaliana AT5G53040 N
Bo2g046220 Brassica oleracea Bo2g046220 N
Bo9g108730 Brassica oleracea Bo9g108730 N
Bra003088 Brassica rapa Bra003088 N
Bra022622 Brassica rapa Bra022622 N
fgenesh1_pm.C_scaffold_8001005 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8001005 N
GLYMA06G13540 Glycine max GLYMA06G13540 N
GSMUA_AchrUn_randomG11290_001 Musa acuminata GSMUA_AchrUn_randomG11290_001 N
30024.m001687 Ricinus communis 30024.m001687 N
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N
POPTR_0012s02390 Populus trichocarpa POPTR_0012s02390 N
POPTR_0015s01410 Populus trichocarpa POPTR_0015s01410 N
PRUPE_ppa015130mg Prunus persica PRUPE_ppa015130mg N
Solyc03g083040.1 Solanum lycopersicum Solyc03g083040.1 N
TCM_015430 Theobroma cacao TCM_015430 N
VIT_16s0098g01730 Vitis vinifera VIT_16s0098g01730 N
Cla004331 Citrullus lanatus Cla004331 N