CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm003809
(
Prunus mume
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pm003809
T296620_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC035
M07186_2.00
Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG
Dap-seq
OMalley et al.(2016)
ANAC034_col
0.948
0.939
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm003809
NAC/NAM
3
128
MPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Prunus mume
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M422DRAFT_252964
Sphaerobolus stellatus
M422DRAFT_252964
N
M422DRAFT_253772
Sphaerobolus stellatus
M422DRAFT_253772
N
M422DRAFT_253861
Sphaerobolus stellatus
M422DRAFT_253861
N
M422DRAFT_256037
Sphaerobolus stellatus
M422DRAFT_256037
N
M422DRAFT_266884
Sphaerobolus stellatus
M422DRAFT_266884
N
M422DRAFT_276596
Sphaerobolus stellatus
M422DRAFT_276596
N