CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29032.m000021
(
Ricinus communis
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
29032.m000021
T296737_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
JUB1
M07191_2.00
Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR
Dap-seq
OMalley et al.(2016)
ANAC042_col_a
0.921
0.711
ANAC094
M07236_2.00
Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR
Dap-seq
OMalley et al.(2016)
ANAC094_col_a
0.917
0.851
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29032.m000021
NAC/NAM
16
142
LPGFRFHPTDEELVGFYLKRKIQQRSLPIELIKQVDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSDGTKCIGLKKSLVFYRGRAAKGMKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Ricinus communis
TFs
271 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_08510
Beauveria bassiana
BBA_08510
N
CCM_04496
Cordyceps militaris
CCM_04496
N
COCMIDRAFT_6077
Bipolaris oryzae
COCMIDRAFT_6077
N
M437DRAFT_47167
Aureobasidium melanogenum
M437DRAFT_47167
N