CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_002_00663
(
Aquilegia coerulea
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Aquca_002_00663
T297157_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC029
M00973_2.00
Arabidopsis thaliana
NBACGBMWNN
NNWKVCGTVN
PBM
Lindemose et al.(2014)
NAP
0.917
0.763
NAC029
M02369_2.00
Arabidopsis thaliana
NRGTCAWNN
NNWTGACYN
PBM
Weirauch et al.(2014)
pTH8397
0.917
0.763
NAC029
M07180_2.00
Arabidopsis thaliana
NCGTVHNNNWYACGBMA
TKVCGTRWNNNDBACGN
Dap-seq
OMalley et al.(2016)
NAP_colamp_a
0.917
0.763
NAC029
M07181_2.00
Arabidopsis thaliana
WYACGBMAYYD
HRRTKVCGTRW
Dap-seq
OMalley et al.(2016)
NAP_col_v3a
0.917
0.763
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_002_00663.1
NAC/NAM
10
134
PPGFRFHPTDEELIMYYLRNQMVSRTCPISIISEVDIYKFDPWELPEKADFGENEWYFFTPRDRKYPNGVRPNRATTSGYWKATGTDKAIHSGSKYVGVRKTLVFYEGRPPKGVKSDWIMNEYRL
Aquca_002_00663.2
NAC/NAM
2
85
MFINVEKADFGENEWYFFTPRDRKYPNGVRPNRATTSGYWKATGTDKAIHSGSKYVGVRKTLVFYEGRPPKGVKSDWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Aquilegia coerulea
TFs
52 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_042705
Theobroma cacao
TCM_042705
N
VIT_13s0019g01810
Vitis vinifera
VIT_13s0019g01810
N
Eucgr.J01244
Eucalyptus grandis
Eucgr.J01244
N