MDP0000169485 (Malus domestica)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 MDP0000169485 T298416_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC13
M07170_2.00 		Arabidopsis thaliana
TDNCTTGYYNNNCAAG
CTTGNNNRRCAAGNHA		 Dap-seq
OMalley et al.(2016)
ANAC013_col_a 		0.898 0.754
ANAC13
M07171_2.00 		Arabidopsis thaliana
CTTGYBHNNCAAGNHAH
DTDNCTTGNNDVRCAAG		 Dap-seq
OMalley et al.(2016)
ANAC013_colamp_a 		0.898 0.754
ANAC13
M11077_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANAC013_Q2 		0.898 0.754
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000169485 NAC/NAM 18 144

Links

Other NAC/NAM family TFs
Other Malus domestica TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC13 Arabidopsis thaliana AT1G32870 D 0.898
cassava22173.valid.m1 Manihot esculenta cassava22173.valid.m1 I 0.933
ANAC13 Arabidopsis lyrata fgenesh2_kg.1__3425__AT1G32870.2 I 0.904
mg018130m Mimulus guttatus mg018130m I 0.908
mgf022344m Mimulus guttatus mgf022344m I 0.875
Bostr.3359s0074 Boechera stricta Bostr.3359s0074 I 0.900
Cagra.1443s0015 Capsella grandiflora Cagra.1443s0015 I 0.895
Carubv10008817m.g Capsella rubella Carubv10008817m.g I 0.893
Ciclev10000612m.g Citrus clementina Ciclev10000612m.g I 0.932
Eucgr.E01095 Eucalyptus grandis Eucgr.E01095 I 0.882
evm.TU.supercontig_26.135 Carica papaya evm.TU.supercontig_26.135 I 0.933
Gorai.005G076200 Gossypium raimondii Gorai.005G076200 I 0.919
Gorai.009G260000 Gossypium raimondii Gorai.009G260000 I 0.943
Lus10008285.g Linum usitatissimum Lus10008285.g I 0.875
Lus10028713.g Linum usitatissimum Lus10028713.g I 0.921
Lus10033251.g Linum usitatissimum Lus10033251.g I 0.875
MDP0000146969 Malus domestica MDP0000146969 I 0.969
MDP0000266908 Malus domestica MDP0000266908 I 0.873
MDP0000852271 Malus domestica MDP0000852271 I 0.946
SapurV1A.0134s0420 Salix purpurea SapurV1A.0134s0420 I 0.921
SapurV1A.0348s0040 Salix purpurea SapurV1A.0348s0040 I 0.908
Thhalv10007369m.g Eutrema salsugineum Thhalv10007369m.g I 0.894
Solyc12g056790.1 Solanum lycopersicum Solyc12g056790.1 I 0.893
PGSC0003DMG400031149 Solanum tuberosum PGSC0003DMG400031149 I 0.909
POPTR_0002s06210 Populus trichocarpa POPTR_0002s06210 I 0.922
POPTR_0005s22180 Populus trichocarpa POPTR_0005s22180 I 0.920
POPTR_0011s15230 Populus trichocarpa POPTR_0011s15230 I 0.879
PRUPE_ppa001291mg Prunus persica PRUPE_ppa001291mg I 0.879
Pm029581 Prunus mume Pm029581 I 0.879
Solyc04g072220.2 Solanum lycopersicum Solyc04g072220.2 I 0.904
TCM_036587 Theobroma cacao TCM_036587 I 0.939
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.954
Cla013854 Citrullus lanatus Cla013854 I 0.914
GSMUA_AchrUn_randomG11980_001 Musa acuminata GSMUA_AchrUn_randomG11980_001 I 0.895
PRUPE_ppa003410mg Prunus persica PRUPE_ppa003410mg N 0.950
PGSC0003DMG400016962 Solanum tuberosum PGSC0003DMG400016962 N 0.900
MDP0000219488 Malus domestica MDP0000219488 N 0.883
MTR_1g097300 Medicago truncatula MTR_1g097300 N 0.923
GLYMA20G31210 Glycine max GLYMA20G31210 N 0.922
GLYMA10G36360 Glycine max GLYMA10G36360 N 0.923
LjSGA_007769.1 Lotus japonicus LjSGA_007769.1 N 0.891
gene27539-v1.0-hybrid Fragaria vesca gene27539-v1.0-hybrid N 0.944
Eucgr.F02771 Eucalyptus grandis Eucgr.F02771 N 0.885
Ca_04337 Cicer arietinum Ca_04337 N 0.915
Aquca_017_00010 Aquilegia coerulea Aquca_017_00010 N 0.905
Cla016588 Citrullus lanatus Cla016588 N 0.929
Pm022358 Prunus mume Pm022358 N 0.950
Cucsa.364130 Cucumis sativus Cucsa.364130 N 0.900