orange1.1g007598m.g (Citrus sinensis)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 orange1.1g007598m.g T298632_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.911 0.860
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.911 0.860
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.911 0.860
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.911 0.860
NAC053
M07202_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAG
CTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_colamp_a 		0.896 0.825
NAC053
M07203_2.00 		Arabidopsis thaliana
TTWCTTGNNNVRCAAGH
DCTTGYBNNNCAAGWAA		 Dap-seq
OMalley et al.(2016)
ANAC053_col 		0.896 0.825
NAC053
M11079_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G10500_Q2 		0.896 0.825
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g007598m NAC/NAM 11 137
orange1.1g008907m NAC/NAM 11 137
orange1.1g008921m NAC/NAM 11 137
orange1.1g009389m NAC/NAM 11 137
orange1.1g009697m NAC/NAM 11 137
orange1.1g011830m NAC/NAM 2 65
orange1.1g013960m NAC/NAM 11 137

Links

Other NAC/NAM family TFs
Other Citrus sinensis TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
slbo Drosophila melanogaster FBgn0005638 D
PPAI007786 Phlebotomus papatasi PPAI007786 I
AGAP011096 Anopheles gambiae AGAP011096 I
MDOA000553 Musca domestica MDOA000553 I
LLOJ006051 Lutzomyia longipalpis LLOJ006051 I
ASIS014644 Anopheles sinensis ASIS014644 I
AMIN008497 Anopheles minimus AMIN008497 I
AMEM011145 Anopheles merus AMEM011145 I
AMEC014175 Anopheles melas AMEC014175 I
AMAM003092 Anopheles maculatus AMAM003092 I
AFUN001809 Anopheles funestus AFUN001809 I
AEPI002124 Anopheles epiroticus AEPI002124 I
ACUA022787 Anopheles culicifacies ACUA022787 I
ACOM023078 Anopheles coluzzii ACOM023078 I
ACHR008909 Anopheles christyi ACHR008909 I
AATE016567 Anopheles atroparvus AATE016567 I
AARA005525 Anopheles arabiensis AARA005525 I
AALB010747 Anopheles albimanus AALB010747 I
NV14868 Nasonia vitripennis NV14868 I
GE11469 Drosophila yakuba FBgn0229274 I
GD24965 Drosophila simulans FBgn0196278 I
GM11843 Drosophila sechellia FBgn0166784 I
GL20490 Drosophila persimilis FBgn0158085 I
GI18345 Drosophila mojavensis FBgn0141084 I
GG19941 Drosophila erecta FBgn0112141 I
GF13466 Drosophila ananassae FBgn0090495 I
GA18129 Drosophila pseudoobscura FBgn0078137 I