CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TRIVIDRAFT_114530
(
Trichoderma virens
)
Ndt80/PhoG
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05224 (NDT80_PhoG)
IPR007888
TRIVIDRAFT_114530
T300113_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vib-1
M02387_2.00
Neurospora crassa
NNNDTHRYRN
NYRYDAHNNN
PBM
Weirauch et al.(2014)
pTH9676
0.744
0.744
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK27352
Ndt80/PhoG
171
335
ELTCYRRNLFQISGSLITPRGQLSVVNESNETLPVSNMEVAISAIESVDGNPVRLIVIPWKTPPPNAPEITQSPDQEPAALPLIPFQDDGSEPEGDYAVYPIGWRRLQFRIATANNGRRKELQQHFVLHLKVFGTLSDNTKVVLTESTTAPIVVRGRSPRNFQAR
Links
Other
Ndt80/PhoG
family TFs
Other
Trichoderma virens
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS02G0266800
Oryza sativa
OS02G0266800
D
ONIVA06G27820
Oryza nivara
ONIVA06G27820
I
ONIVA02G12920
Oryza nivara
ONIVA02G12920
I
OPUNC02G10230
Oryza punctata
OPUNC02G10230
I
OPUNC06G21410
Oryza punctata
OPUNC06G21410
I
ORGLA02G0052000
Oryza glaberrima
ORGLA02G0052000
I
ORGLA02G0104200
Oryza glaberrima
ORGLA02G0104200
I
ORGLA06G0198800
Oryza glaberrima
ORGLA06G0198800
I
ORUFI02G05790
Oryza rufipogon
ORUFI02G05790
I
ORUFI02G11610
Oryza rufipogon
ORUFI02G11610
I
ORUFI06G25410
Oryza rufipogon
ORUFI06G25410
I
OS02G0175100
Oryza sativa
OS02G0175100
I
OS06G0662200
Oryza sativa
OS06G0662200
I
Sb04g005020
Sorghum bicolor
Sb04g005020
I
Sb10g026450
Sorghum bicolor
Sb10g026450
I
Si007043m.g
Setaria italica
Si007043m.g
I
Si017778m.g
Setaria italica
Si017778m.g
I
Pavir.Aa03364
Panicum virgatum
Pavir.Aa03364
I
Pavir.Ab00505
Panicum virgatum
Pavir.Ab00505
I
Pavir.Db00496
Panicum virgatum
Pavir.Db00496
I
PDK_20s1417191g003
Phoenix dactylifera
PDK_20s1417191g003
I
OBART02G05680
Oryza barthii
OBART02G05680
I
BGIOSGA007649
Oryza indica
BGIOSGA007649
I
BGIOSGA020738
Oryza indica
BGIOSGA020738
I
BGIOSGA020743
Oryza indica
BGIOSGA020743
I
GRMZM2G098904
Zea mays
GRMZM2G098904
I
GRMZM2G103647
Zea mays
GRMZM2G103647
I
GSMUA_Achr1G23640_001
Musa acuminata
GSMUA_Achr1G23640_001
I
LPERR02G04950
Leersia perrieri
LPERR02G04950
I
LPERR06G19690
Leersia perrieri
LPERR06G19690
I
OB06G31430
Oryza brachyantha
OB06G31430
I
BGIOSGA006734
Oryza indica
BGIOSGA006734
I
OBART02G11580
Oryza barthii
OBART02G11580
I
OGLUM02G05620
Oryza glumaepatula
OGLUM02G05620
I
OGLUM02G11500
Oryza glumaepatula
OGLUM02G11500
I
OGLUM06G24950
Oryza glumaepatula
OGLUM06G24950
I
OLONG_021042
Oryza longistaminata
OLONG_021042
I
OMERI02G06470
Oryza meridionalis
OMERI02G06470
I
OMERI02G12230
Oryza meridionalis
OMERI02G12230
I
OMERI06G23650
Oryza meridionalis
OMERI06G23650
I
ONIVA02G06040
Oryza nivara
ONIVA02G06040
I