CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo9g177030
(
Brassica oleracea
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
Bo9g177030
T300383_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo9g177030.1
NFX
193
210
CGHRCLLLCHPGPCASCP
Bo9g177030.1
NFX
235
263
CGDVCDKVLDCEIHSCREICHDGECPPCR
Bo9g177030.1
NFX
298
316
CGKHVCERGCHGGECGLCP
Bo9g177030.1
NFX
352
371
CGYHRCPERCHRGACLETCR
Bo9g177030.1
NFX
405
423
CGKHPCRRRCCDGQCPPCS
Bo9g177030.1
NFX
426
450
CGKKLKCRNHKCQSPCHRGQCAPCP
Bo9g177030.1
NFX
497
509
PHKCHYGACPPCR
Bo9g177030.1
NFX
600
611
CGNHYCSFTCHP
Bo9g177030.1
NFX
641
658
CQHPCPRRCHPEDCPPCK
Bo9g177030.1
NFX
704
723
CTHLCPEICHPGQCPSPEKC
Links
Other
NFX
family TFs
Other
Brassica oleracea
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EEL_0000772901
Elaeophora elaphi
EEL_0000772901
N
TELCIR_22024
Teladorsagia circumcincta
TELCIR_22024
N
TCLT_0000814301
Thelazia callipaeda
TCLT_0000814301
N
SVUK_0000253901
Strongylus vulgaris
SVUK_0000253901
N
scaffold26-EXSNAP2012.71
Pristionchus exspectatus
scaffold26-EXSNAP2012.71
N
nOo.2.0.1.g00221
Onchocerca ochengi
nOo.2.0.1.g00221
N
nLs.2.1.2.g07398
Litomosoides sigmodontis
nLs.2.1.2.g07398
N
NECAME_03042
Necator americanus
NECAME_03042
N
nDi.2.2.2.g02557
Dirofilaria immitis
nDi.2.2.2.g02557
N
nAv.1.0.1.g00358
Acanthocheilonema viteae
nAv.1.0.1.g00358
N
HPLM_0000480901
Haemonchus placei
HPLM_0000480901
N
HPBE_0001360801
Heligmosomoides bakeri
HPBE_0001360801
N
Hba_17907
Heterorhabditis bacteriophora
Hba_17907
N
GPUH_0001231601
Gongylonema pulchrum
GPUH_0001231601
N
WUBG_00184
Wuchereria bancrofti
WUBG_00184
N
DME_0000623401
Dracunculus medinensis
DME_0000623401
N
ASU_14749
Ascaris suum
ASU_14749
N
ANCCEY_01480
Ancylostoma ceylanicum
ANCCEY_01480
N
ANCCAN_14002
Ancylostoma caninum
ANCCAN_14002
N
ACOC_0000692801
Angiostrongylus costaricensis
ACOC_0000692801
N
WBGene00243366
Onchocerca volvulus
WBGene00243366
N
T10B5.10
Caenorhabditis elegans
WBGene00020396
N
PPA10390
Pristionchus pacificus
PPA10390
N
LOAG_17692
Loa loa
LOAG_17692
N
CRE18887
Caenorhabditis remanei
CRE18887
N
CJA14938
Caenorhabditis japonica
CJA14938
N
CBN31223
Caenorhabditis brenneri
CBN31223
N
Bm5704
Brugia malayi
Bm5704
N