CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGAP002234
(
Anopheles gambiae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
AGAP002234
T301289_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr83
M06434_2.00
Drosophila melanogaster
RAAGTCANHVWVGM
KCBWBDNTGACTTY
B1H
Zhu et al.(2011)
Hr83_SANGER_5_FBgn0037436
0.977
0.671
NR2E1
M02394_2.00
Homo sapiens
NGAGGTCARN
NYTGACCTCN
PBM
Weirauch et al.(2014)
pTH6281
0.788
0.614
Nr2e1
M00814_2.00
Mus musculus
NNNGTYRNNN
NNNYRACNNN
PBM
Weirauch et al.(2013)
pTH2936
0.788
0.614
A1YGC6_PANPA
M02421_2.00
Pan paniscus
NNGTCANNN
NNNTGACNN
PBM
Weirauch et al.(2014)
pTH5561
0.788
0.614
NR2E1
M03364_2.00
Homo sapiens
WDAAGTCAA
TTGACTTHW
SELEX
Jolma et al.(2013)
NR2E1_1
0.788
0.614
NR2E1
M03365_2.00
Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY
SELEX
Jolma et al.(2013)
NR2E1_2
0.788
0.614
Nr2e1
M03427_2.00
Mus musculus
WDAAGTCAW
WTGACTTHW
SELEX
Jolma et al.(2013)
Nr2e1_1
0.788
0.614
Nr2e1
M03428_2.00
Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY
SELEX
Jolma et al.(2013)
Nr2e1_2
0.788
0.614
NR2E1
M05585_2.00
Homo sapiens
NNAAGTCAN
NTGACTTNN
SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX
0.788
0.614
NR2E1
M05586_2.00
Homo sapiens
NDAAGTCAN
NTGACTTHN
SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX
0.788
0.614
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AGAP002234-PA
Nuclear receptor
7
77
LVCRVCSDRSSGKHYGTVCCDGCSCFFKRSIRKRAVYSCISGQGGCSVDKARRNWCPFCRLQKCFLVGMNA
Links
Other
Nuclear receptor
family TFs
Other
Anopheles gambiae
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
APRR2
Arabidopsis thaliana
AT4G18020
D
0.000
30054.m000786
Ricinus communis
30054.m000786
I
0.000
PDK_20s1585631g001
Phoenix dactylifera
PDK_20s1585631g001
I
0.000
cassava2466.valid.m1
Manihot esculenta
cassava2466.valid.m1
I
0.000
cassava42047.valid.m1
Manihot esculenta
cassava42047.valid.m1
I
0.000
cassava42048.valid.m1
Manihot esculenta
cassava42048.valid.m1
I
0.000
Cucsa.313480
Cucumis sativus
Cucsa.313480
I
0.000
Cucsa.321580
Cucumis sativus
Cucsa.321580
I
0.000
Aquca_044_00072
Aquilegia coerulea
Aquca_044_00072
I
0.000
Bostr.30275s0270
Boechera stricta
Bostr.30275s0270
I
0.000
Cagra.1595s0002
Capsella grandiflora
Cagra.1595s0002
I
0.000
Carubv10004540m.g
Capsella rubella
Carubv10004540m.g
I
0.000
Ciclev10031120m.g
Citrus clementina
Ciclev10031120m.g
I
0.000
Eucgr.E00308
Eucalyptus grandis
Eucgr.E00308
I
0.000
evm.TU.supercontig_6.428
Carica papaya
evm.TU.supercontig_6.428
I
0.000
gene10484-v1.0-hybrid
Fragaria vesca
gene10484-v1.0-hybrid
I
0.000
Gorai.003G180100
Gossypium raimondii
Gorai.003G180100
I
0.000
Gorai.004G188300
Gossypium raimondii
Gorai.004G188300
I
0.000
Gorai.008G228800
Gossypium raimondii
Gorai.008G228800
I
0.000
Lus10011044.g
Linum usitatissimum
Lus10011044.g
I
0.000
Lus10040109.g
Linum usitatissimum
Lus10040109.g
I
0.000
MDP0000237396
Malus domestica
MDP0000237396
I
0.000
MDP0000248863
Malus domestica
MDP0000248863
I
0.000
orange1.1g008254m.g
Citrus sinensis
orange1.1g008254m.g
I
0.000
SapurV1A.0132s0010
Salix purpurea
SapurV1A.0132s0010
I
0.000
SapurV1A.1296s0050
Salix purpurea
SapurV1A.1296s0050
I
0.000
Thhalv10024919m.g
Eutrema salsugineum
Thhalv10024919m.g
I
0.000
PK19826.1
Cannabis sativa
PK19826.1
I
0.000
chr2.CM0021.770.nc
Lotus japonicus
chr2.CM0021.770.nc
I
0.000
chr4.CM0831.100.nd
Lotus japonicus
chr4.CM0831.100.nd
I
0.000
AMTR_s00149p00035260
Amborella trichopoda
AMTR_s00149p00035260
I
0.000
MTR_5g014040
Medicago truncatula
MTR_5g014040
I
0.000
Bo1g019180
Brassica oleracea
Bo1g019180
I
0.000
Bo7g105690
Brassica oleracea
Bo7g105690
I
0.000
Bra012623
Brassica rapa
Bra012623
I
0.000
Bra013277
Brassica rapa
Bra013277
I
0.000
Bra013278
Brassica rapa
Bra013278
I
0.000
Bra013279
Brassica rapa
Bra013279
I
0.000
APRR2
Arabidopsis lyrata
fgenesh2_kg.7__2503__AT4G18020.2
I
0.000
GLYMA01G40900
Glycine max
GLYMA01G40900
I
0.000
GLYMA05G06070
Glycine max
GLYMA05G06070
I
0.000
GLYMA11G04441
Glycine max
GLYMA11G04441
I
0.000
GLYMA17G16360
Glycine max
GLYMA17G16360
I
0.000
GSMUA_Achr11G17740_001
Musa acuminata
GSMUA_Achr11G17740_001
I
0.000
GSMUA_Achr2G18200_001
Musa acuminata
GSMUA_Achr2G18200_001
I
0.000
MTR_4g098870
Medicago truncatula
MTR_4g098870
I
0.000
Pm014733
Prunus mume
Pm014733
I
0.000
PGSC0003DMG400024217
Solanum tuberosum
PGSC0003DMG400024217
I
0.000
POPTR_0001s02910
Populus trichocarpa
POPTR_0001s02910
I
0.000
POPTR_0003s08600
Populus trichocarpa
POPTR_0003s08600
I
0.000
PRUPE_ppa004161mg
Prunus persica
PRUPE_ppa004161mg
I
0.000
SELMODRAFT_428906
Selaginella moellendorffii
SELMODRAFT_428906
I
0.000
Solyc06g061030.2
Solanum lycopersicum
Solyc06g061030.2
I
0.000
Solyc08g077230.2
Solanum lycopersicum
Solyc08g077230.2
I
0.000
TCM_015780
Theobroma cacao
TCM_015780
I
0.000
APRR2
Vitis vinifera
VIT_02s0012g00570
I
0.000
Ca_02285
Cicer arietinum
Ca_02285
I
0.000
Ca_12825
Cicer arietinum
Ca_12825
I
0.000
Ca_24009
Cicer arietinum
Ca_24009
I
0.000
Cla008926
Citrullus lanatus
Cla008926
I
0.000
Cla016403
Citrullus lanatus
Cla016403
I
0.000