CBN13569 (Caenorhabditis brenneri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBN13569 T301755_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.769 0.529
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.758 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN13569 Nuclear receptor 21 92

Links

Other Nuclear receptor family TFs
Other Caenorhabditis brenneri TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.758
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.769
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.773
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.759
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.823
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.816
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.759
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.818
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.864
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.759
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.818
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.771
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.774
L889_g6696 Steinernema feltiae L889_g6696 I 0.811
L892_g2782 Steinernema scapterisci L892_g2782 I 0.775
L898_g12798 Steinernema monticolum L898_g12798 I 0.793
L898_g3512 Steinernema monticolum L898_g3512 I 0.768
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.819
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.773
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.834
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.808
CBN28290 Caenorhabditis brenneri CBN28290 I 0.754
CBG06609 Caenorhabditis briggsae CBG06609 I 0.752
CBG09567 Caenorhabditis briggsae CBG09567 I 0.801
CBG20727 Caenorhabditis briggsae CBG20727 I 0.965
CBG20729 Caenorhabditis briggsae CBG20729 I 0.965
CBG22870 Caenorhabditis briggsae CBG22870 I 0.750
CBN21486 Caenorhabditis brenneri CBN21486 I 0.754
CBN23838 Caenorhabditis brenneri CBN23838 I 0.967
CBG06599 Caenorhabditis briggsae CBG06599 I 0.752
CJA09697 Caenorhabditis japonica CJA09697 I 0.858
CRE15644 Caenorhabditis remanei CRE15644 I 0.967
CRE15675 Caenorhabditis remanei CRE15675 I 0.971
CRE30948 Caenorhabditis remanei CRE30948 I 0.823
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.960
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.960
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.947
Minc14668 Meloidogyne incognita Minc14668 I 0.826
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.882
L892_g14834 Steinernema scapterisci L892_g14834 N 0.802
L898_g4018 Steinernema monticolum L898_g4018 N 0.757