CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE10161
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE10161
T302154_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.858
0.629
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE10161
Nuclear receptor
75
144
SVCAVCGDGIAKLHYGVLACYGCKGFFRRTLTGKYRYACRFGNNCIVDKFHRNSCRYCRFQRCIQAGMDP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
134 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nhr-7
Caenorhabditis elegans
WBGene00003606
D
0.858
WUBG_10752
Wuchereria bancrofti
WUBG_10752
I
0.939
Bm12053
Brugia malayi
Bm12053
I
0.939
Bm2389
Brugia malayi
Bm2389
I
0.996
Bm4894
Brugia malayi
Bm4894
I
0.939
CBG06052
Caenorhabditis briggsae
CBG06052
I
0.858
CBG17744
Caenorhabditis briggsae
CBG17744
I
0.994
CBG19594
Caenorhabditis briggsae
CBG19594
I
0.951
CBG19604
Caenorhabditis briggsae
CBG19604
I
0.953
CBN07936
Caenorhabditis brenneri
CBN07936
I
0.953
CBN13729
Caenorhabditis brenneri
CBN13729
I
0.986
CBN18797
Caenorhabditis brenneri
CBN18797
I
0.878
CBN20828
Caenorhabditis brenneri
CBN20828
I
0.953
CBN26258
Caenorhabditis brenneri
CBN26258
I
0.878
CBN31048
Caenorhabditis brenneri
CBN31048
I
0.951
CJA04720
Caenorhabditis japonica
CJA04720
I
0.953
CJA08328
Caenorhabditis japonica
CJA08328
I
0.996
CRE02711
Caenorhabditis remanei
CRE02711
I
0.996
CRE06661
Caenorhabditis remanei
CRE06661
I
0.951
CRE06667
Caenorhabditis remanei
CRE06667
I
0.953
CRE12779
Caenorhabditis remanei
CRE12779
I
0.854
LOAG_01074
Loa loa
LOAG_01074
I
0.996
LOAG_05485
Loa loa
LOAG_05485
I
0.939
PPA21285
Pristionchus pacificus
PPA21285
I
0.961
Ppa-nhr-31
Pristionchus pacificus
PPA24219
I
0.996
nhr-31
Caenorhabditis elegans
WBGene00003625
I
0.996
nhr-88
Caenorhabditis elegans
WBGene00003678
I
0.953
nhr-119
Caenorhabditis elegans
WBGene00003709
I
0.935
WBGene00241236
Onchocerca volvulus
WBGene00241236
I
0.993
WBGene00248075
Onchocerca volvulus
WBGene00248075
I
0.939
Minc15420
Meloidogyne incognita
Minc15420
I
0.932
ACAC_0000239001
Angiostrongylus cantonensis
ACAC_0000239001
I
0.950
ACAC_0000409401
Angiostrongylus cantonensis
ACAC_0000409401
I
0.850
ACAC_0001180201
Angiostrongylus cantonensis
ACAC_0001180201
I
0.940
ACOC_0001326501
Angiostrongylus costaricensis
ACOC_0001326501
I
0.950
ANCCAN_03474
Ancylostoma caninum
ANCCAN_03474
I
0.995
ANCCAN_12539
Ancylostoma caninum
ANCCAN_12539
I
0.940
ANCCEY_03357
Ancylostoma ceylanicum
ANCCEY_03357
I
0.950
ANCCEY_05105
Ancylostoma ceylanicum
ANCCEY_05105
I
0.845
ASIM_0001301101
Anisakis simplex
ASIM_0001301101
I
0.847
ASIM_0001309901
Anisakis simplex
ASIM_0001309901
I
0.895
ASU_01199
Ascaris suum
ASU_01199
I
0.872
ASU_04305
Ascaris suum
ASU_04305
I
0.996
BTMF_0001198801
Brugia timori
BTMF_0001198801
I
0.939
BXY_0008800
Bursaphelenchus xylophilus
BXY_0008800
I
0.862
BXY_0740100
Bursaphelenchus xylophilus
BXY_0740100
I
0.995
BXY_1595900
Bursaphelenchus xylophilus
BXY_1595900
I
0.901
BXY_1600300
Bursaphelenchus xylophilus
BXY_1600300
I
0.957
DICVIV_02348
Dictyocaulus viviparus
DICVIV_02348
I
0.950
DICVIV_10822
Dictyocaulus viviparus
DICVIV_10822
I
0.995
DME_0000188101
Dracunculus medinensis
DME_0000188101
I
0.994
DME_0000742401
Dracunculus medinensis
DME_0000742401
I
0.925
DME_0000960901
Dracunculus medinensis
DME_0000960901
I
0.939
EVEC_0001115901
Enterobius vermicularis
EVEC_0001115901
I
0.995
genemark-nMf.1.1.scaf00140-processed-gene-0.6
Meloidogyne floridensis
genemark-nMf.1.1.scaf00140-processed-gene-0.6
I
0.923
GPLIN_000268400
Globodera pallida
GPLIN_000268400
I
0.944
GPLIN_001106000
Globodera pallida
GPLIN_001106000
I
0.988
GPUH_0000393501
Gongylonema pulchrum
GPUH_0000393501
I
0.939
Hba_06510
Heterorhabditis bacteriophora
Hba_06510
I
0.995
Hba_14163
Heterorhabditis bacteriophora
Hba_14163
I
0.940
Hba_14958
Heterorhabditis bacteriophora
Hba_14958
I
0.950
HCOI00435200
Haemonchus contortus
HCOI00435200
I
0.887
HCOI00769300
Haemonchus contortus
HCOI00769300
I
0.950
HCOI01268300
Haemonchus contortus
HCOI01268300
I
0.953
HCOI01406200
Haemonchus contortus
HCOI01406200
I
0.950
HCOI01716000
Haemonchus contortus
HCOI01716000
I
0.995
HPBE_0001043101
Heligmosomoides bakeri
HPBE_0001043101
I
0.950
HPLM_0001092501
Haemonchus placei
HPLM_0001092501
I
0.995
HPLM_0001680701
Haemonchus placei
HPLM_0001680701
I
0.950
L596_g20569
Steinernema carpocapsae
L596_g20569
I
0.862
L596_g25297
Steinernema carpocapsae
L596_g25297
I
0.923
L596_g27086
Steinernema carpocapsae
L596_g27086
I
0.939
L596_g3809
Steinernema carpocapsae
L596_g3809
I
0.992
L889_g29204
Steinernema feltiae
L889_g29204
I
0.939
L889_g5777
Steinernema feltiae
L889_g5777
I
0.862
L889_g8361
Steinernema feltiae
L889_g8361
I
0.924
L889_g8621
Steinernema feltiae
L889_g8621
I
0.992
L893_g27201
Steinernema glaseri
L893_g27201
I
0.992
L893_g29388
Steinernema glaseri
L893_g29388
I
0.862
L893_g32432
Steinernema glaseri
L893_g32432
I
0.804
L893_g6878
Steinernema glaseri
L893_g6878
I
0.953
L898_g10316
Steinernema monticolum
L898_g10316
I
0.923
L898_g24498
Steinernema monticolum
L898_g24498
I
0.862
L898_g2799
Steinernema monticolum
L898_g2799
I
0.992
L898_g4801
Steinernema monticolum
L898_g4801
I
0.939
MhA1_Contig984.frz3.gene20
Meloidogyne hapla
MhA1_Contig984.frz3.gene20
I
0.944
nAv.1.0.1.g01698
Acanthocheilonema viteae
nAv.1.0.1.g01698
I
0.939
NBR_0000170601
Nippostrongylus brasiliensis
NBR_0000170601
I
0.953
NBR_0001013001
Nippostrongylus brasiliensis
NBR_0001013001
I
0.995
NBR_0001432001
Nippostrongylus brasiliensis
NBR_0001432001
I
0.935
nDi.2.2.2.g02781
Dirofilaria immitis
nDi.2.2.2.g02781
I
0.939
nDi.2.2.2.g03563
Dirofilaria immitis
nDi.2.2.2.g03563
I
0.995
NECAME_05125
Necator americanus
NECAME_05125
I
0.940
NECAME_12696
Necator americanus
NECAME_12696
I
0.950
nLs.2.1.2.g08709
Litomosoides sigmodontis
nLs.2.1.2.g08709
I
0.939
nOo.2.0.1.g04046
Onchocerca ochengi
nOo.2.0.1.g04046
I
0.939
OESDEN_02652
Oesophagostomum dentatum
OESDEN_02652
I
0.950
OESDEN_12257
Oesophagostomum dentatum
OESDEN_12257
I
0.995
OESDEN_17109
Oesophagostomum dentatum
OESDEN_17109
I
0.940
OFLC_0001511801
Onchocerca flexuosa
OFLC_0001511801
I
0.939
PEQ_0000633601
Parascaris equorum
PEQ_0000633601
I
0.886
PTRK_0000207700
Parastrongyloides trichosuri
PTRK_0000207700
I
0.995
PTRK_0000497300
Parastrongyloides trichosuri
PTRK_0000497300
I
0.839
PTRK_0000510500
Parastrongyloides trichosuri
PTRK_0000510500
I
0.884
PTRK_0000775900
Parastrongyloides trichosuri
PTRK_0000775900
I
0.945
RSKR_0000832300
Rhabditophanes kr3021
RSKR_0000832300
I
0.994
scaffold51-EXSNAP2012.23
Pristionchus exspectatus
scaffold51-EXSNAP2012.23
I
0.961
scaffold601-EXSNAP2012.19
Pristionchus exspectatus
scaffold601-EXSNAP2012.19
I
0.996
SMUV_0000212501
Syphacia muris
SMUV_0000212501
I
0.995
SMUV_0000859101
Syphacia muris
SMUV_0000859101
I
0.901
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
I
0.932
SPAL_0000110800
Strongyloides papillosus
SPAL_0000110800
I
0.903
SPAL_0000620000
Strongyloides papillosus
SPAL_0000620000
I
0.986
SPAL_0001157400
Strongyloides papillosus
SPAL_0001157400
I
0.945
SPAL_0001436300
Strongyloides papillosus
SPAL_0001436300
I
0.884
SSTP_0000217700
Strongyloides stercoralis
SSTP_0000217700
I
0.945
SSTP_0000662400
Strongyloides stercoralis
SSTP_0000662400
I
0.986
SSTP_0000831700
Strongyloides stercoralis
SSTP_0000831700
I
0.884
SSTP_0001234400
Strongyloides stercoralis
SSTP_0001234400
I
0.903
SVE_0137800
Strongyloides venezuelensis
SVE_0137800
I
0.903
SVE_0301400
Strongyloides venezuelensis
SVE_0301400
I
0.884
SVE_1633700
Strongyloides venezuelensis
SVE_1633700
I
0.945
SVE_1965700
Strongyloides venezuelensis
SVE_1965700
I
0.986
TCLT_0000173501
Thelazia callipaeda
TCLT_0000173501
I
0.939
TELCIR_05080
Teladorsagia circumcincta
TELCIR_05080
I
0.950
TELCIR_07363
Teladorsagia circumcincta
TELCIR_07363
I
0.950
CBN25890
Caenorhabditis brenneri
CBN25890
N
0.827
ANCCAN_09370
Ancylostoma caninum
ANCCAN_09370
N
0.762
ANCDUO_09404
Ancylostoma duodenale
ANCDUO_09404
N
0.919
BTMF_0000225801
Brugia timori
BTMF_0000225801
N
0.913
maker-nMf.1.1.scaf03124-snap-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf03124-snap-gene-0.5
N
0.849
nAv.1.0.1.g09235
Acanthocheilonema viteae
nAv.1.0.1.g09235
N
0.842
nOo.2.0.1.g02048
Onchocerca ochengi
nOo.2.0.1.g02048
N
0.980
RSKR_0000868400
Rhabditophanes kr3021
RSKR_0000868400
N
0.910