CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Alligator_sinensis_CCG019471.1
(
Alligator sinensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Alligator_sinensis_CCG019471.1
T306550_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG019471.1
Nuclear receptor
3
57
CGNECIHYPSLFSFTFLGKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMTL
Links
Other
Nuclear receptor
family TFs
Other
Alligator sinensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI4G14190
Brachypodium distachyon
BRADI4G14190
N
LPERR11G15400
Leersia perrieri
LPERR11G15400
N
MLOC_37477
Hordeum vulgare
MLOC_37477
N
OB11G24570
Oryza brachyantha
OB11G24570
N
ORGLA11G0160400
Oryza glaberrima
ORGLA11G0160400
N
OS11G0601700
Oryza sativa
OS11G0601700
N
Sb05g023730
Sorghum bicolor
Sb05g023730
N
Si026752m.g
Setaria italica
Si026752m.g
N
Traes_4BS_E01AAE6DE
Triticum aestivum
Traes_4BS_E01AAE6DE
N
Pavir.Ha00418
Panicum virgatum
Pavir.Ha00418
N
Pavir.J36771
Panicum virgatum
Pavir.J36771
N