Sjc_0106400 (Schistosoma japonicum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 Sjc_0106400 T307174_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tll
M02408_2.00 		Drosophila melanogaster
NRASGTCAANNN
NNNTTGACSTYN		 PBM
Weirauch et al.(2014)
pTH5714 		0.915 0.689
tll
M03932_2.00 		Drosophila melanogaster
NRAGTCAAAAGTCA
TGACTTTTGACTYN		 SELEX
Nitta et al.(2015)
tll_1 		0.915 0.689
tll
M03933_2.00 		Drosophila melanogaster
NRAGTCAADAAGTCA
TGACTTHTTGACTYN		 SELEX
Nitta et al.(2015)
tll_2 		0.915 0.689
tll
M06558_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Mathelier et al.(2014)
MA0459.1 		0.915 0.689
tll
M06424_2.00 		Drosophila melanogaster
AAAGTYA
TRACTTT		 B1H
Zhu et al.(2011)
tll_FlyReg_FBgn0003720 		0.915 0.689
tll
M06425_2.00 		Drosophila melanogaster
WAAAGTCAAM
KTTGACTTTW		 B1H
Zhu et al.(2011)
tll_NAR_FBgn0003720 		0.915 0.689
tll
M09688_2.00 		Drosophila melanogaster
MAAAGTCAAH
DTTGACTTTK		 Misc
Kulakovskiy et al.(2009)
tll 		0.915 0.689
tll
M11190_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$TLL_Q6 		0.915 0.689
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000010011 Nuclear receptor 14 74

Links

Other Nuclear receptor family TFs
Other Schistosoma japonicum TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf025885m Mimulus guttatus mgf025885m I 0.000
Bo9g014660 Brassica oleracea Bo9g014660 I 0.000
VIT_15s0021g01600 Vitis vinifera VIT_15s0021g01600 I 0.000
VIT_15s0021g01610 Vitis vinifera VIT_15s0021g01610 I 0.000
Cla003678 Citrullus lanatus Cla003678 I 0.000
Cla021384 Citrullus lanatus Cla021384 I 0.000
cassava4507.m1 Manihot esculenta cassava4507.m1 I 0.000
Cucsa.129330 Cucumis sativus Cucsa.129330 I 0.000
mgf021756m Mimulus guttatus mgf021756m I 0.000
VIT_15s0021g01590 Vitis vinifera VIT_15s0021g01590 I 0.000
Bostr.25993s0288 Boechera stricta Bostr.25993s0288 I 0.000
gene21167-v1.0-hybrid Fragaria vesca gene21167-v1.0-hybrid I 0.000
Gorai.007G086100 Gossypium raimondii Gorai.007G086100 I 0.000
Gorai.008G108600 Gossypium raimondii Gorai.008G108600 I 0.000
Lus10013959.g Linum usitatissimum Lus10013959.g I 0.000
MDP0000180950 Malus domestica MDP0000180950 I 0.000
PK26398.1 Cannabis sativa PK26398.1 I 0.000
chr5.CM0909.360.nc Lotus japonicus chr5.CM0909.360.nc I 0.000
PGSC0003DMG400026049 Solanum tuberosum PGSC0003DMG400026049 I 0.000
Bra028690 Brassica rapa Bra028690 I 0.000
Bra035919 Brassica rapa Bra035919 I 0.000
GLYMA10G33810 Glycine max GLYMA10G33810 I 0.000
GSMUA_Achr1G00490_001 Musa acuminata GSMUA_Achr1G00490_001 I 0.000
PGSC0003DMG400007027 Solanum tuberosum PGSC0003DMG400007027 I 0.000
PGSC0003DMG400026046 Solanum tuberosum PGSC0003DMG400026046 I 0.000
TCM_005704 Theobroma cacao TCM_005704 I 0.000
PGSC0003DMG400036566 Solanum tuberosum PGSC0003DMG400036566 I 0.000
PGSC0003DMG400041045 Solanum tuberosum PGSC0003DMG400041045 I 0.000
Solyc01g090300.2 Solanum lycopersicum Solyc01g090300.2 I 0.000
Solyc01g090310.2 Solanum lycopersicum Solyc01g090310.2 I 0.000
Solyc01g090370.1 Solanum lycopersicum Solyc01g090370.1 I 0.000
Solyc05g050790.1 Solanum lycopersicum Solyc05g050790.1 I 0.000
PGSC0003DMG400046672 Solanum tuberosum PGSC0003DMG400046672 N 0.000
Ciclev10024298m.g Citrus clementina Ciclev10024298m.g N 0.000
PGSC0003DMG400025989 Solanum tuberosum PGSC0003DMG400025989 N 0.000
Solyc01g090320.2 Solanum lycopersicum Solyc01g090320.2 N 0.000
Solyc01g090340.2 Solanum lycopersicum Solyc01g090340.2 N 0.000
orange1.1g045684m.g Citrus sinensis orange1.1g045684m.g N 0.000