genemark-nMf.1.1.scaf00140-processed-gene-0.6 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 genemark-nMf.1.1.scaf00140-processed-gene-0.6 T308642_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.878 0.591
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf00140-processed-gene-0.6-mRNA-1 Nuclear receptor 48 113

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.878
Bm2389 Brugia malayi Bm2389 I 0.929
CBG06052 Caenorhabditis briggsae CBG06052 I 0.878
CBG17744 Caenorhabditis briggsae CBG17744 I 0.909
CBG19594 Caenorhabditis briggsae CBG19594 I 0.977
CBN13729 Caenorhabditis brenneri CBN13729 I 0.813
CBN18797 Caenorhabditis brenneri CBN18797 I 0.909
CBN26258 Caenorhabditis brenneri CBN26258 I 0.909
CBN31048 Caenorhabditis brenneri CBN31048 I 0.977
CJA08328 Caenorhabditis japonica CJA08328 I 0.924
CRE02711 Caenorhabditis remanei CRE02711 I 0.923
CRE06661 Caenorhabditis remanei CRE06661 I 0.977
CRE10161 Caenorhabditis remanei CRE10161 I 0.923
CRE12779 Caenorhabditis remanei CRE12779 I 0.874
LOAG_01074 Loa loa LOAG_01074 I 0.929
PPA21285 Pristionchus pacificus PPA21285 I 0.777
Ppa-nhr-31 Pristionchus pacificus PPA24219 I 0.926
nhr-31 Caenorhabditis elegans WBGene00003625 I 0.923
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.970
WBGene00241236 Onchocerca volvulus WBGene00241236 I 0.895
Minc01725 Meloidogyne incognita Minc01725 I 0.775
Minc13525 Meloidogyne incognita Minc13525 I 0.775
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.977
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.898
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.977
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I 0.920
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.977
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.866
ASIM_0001301101 Anisakis simplex ASIM_0001301101 I 0.865
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.963
ASU_01199 Ascaris suum ASU_01199 I 0.899
ASU_04305 Ascaris suum ASU_04305 I 0.929
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.927
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.763
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I 0.916
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.989
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.977
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I 0.920
DME_0000188101 Dracunculus medinensis DME_0000188101 I 0.927
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.975
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I 0.937
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.986
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.765
GPLIN_001106000 Globodera pallida GPLIN_001106000 I 0.878
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I 0.926
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.976
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.903
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.977
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.977
HCOI01716000 Haemonchus contortus HCOI01716000 I 0.920
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.977
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I 0.920
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.977
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.927
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.974
L596_g3809 Steinernema carpocapsae L596_g3809 I 0.906
L596_g3812 Steinernema carpocapsae L596_g3812 I 0.758
L889_g5777 Steinernema feltiae L889_g5777 I 0.935
L889_g6303 Steinernema feltiae L889_g6303 I 0.758
L889_g8361 Steinernema feltiae L889_g8361 I 0.974
L889_g8621 Steinernema feltiae L889_g8621 I 0.906
L893_g27196 Steinernema glaseri L893_g27196 I 0.758
L893_g27201 Steinernema glaseri L893_g27201 I 0.906
L893_g29388 Steinernema glaseri L893_g29388 I 0.927
L893_g32432 Steinernema glaseri L893_g32432 I 0.940
L898_g10316 Steinernema monticolum L898_g10316 I 0.974
L898_g23965 Steinernema monticolum L898_g23965 I 0.754
L898_g24498 Steinernema monticolum L898_g24498 I 0.927
L898_g2799 Steinernema monticolum L898_g2799 I 0.906
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.775
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.775
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.986
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I 0.920
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.970
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I 0.929
NECAME_12696 Necator americanus NECAME_12696 I 0.977
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.977
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I 0.920
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.928
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I 0.920
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.930
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.968
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I 0.895
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.777
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I 0.926
SMUV_0000212501 Syphacia muris SMUV_0000212501 I 0.937
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.939
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.775
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.960
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I 0.846
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.968
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I 0.846
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.968
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.960
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.960
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.968
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I 0.846
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.977
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.977
CBN25890 Caenorhabditis brenneri CBN25890 N 0.902
EVEC_0000733201 Enterobius vermicularis EVEC_0000733201 N 0.880
nOo.2.0.1.g02048 Onchocerca ochengi nOo.2.0.1.g02048 N 0.840
RSKR_0000868400 Rhabditophanes kr3021 RSKR_0000868400 N 0.896