HCOI01268300 (Haemonchus contortus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HCOI01268300 T308792_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.891 0.657
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.845 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI01268300.t1 Nuclear receptor 27 96

Links

Other Nuclear receptor family TFs
Other Haemonchus contortus TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.891
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.845
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.897
WUBG_10752 Wuchereria bancrofti WUBG_10752 I 0.993
Bm12053 Brugia malayi Bm12053 I 0.993
Bm14724 Brugia malayi Bm14724 I 0.897
Bm2389 Brugia malayi Bm2389 I 0.953
Bm4894 Brugia malayi Bm4894 I 0.993
CBG06052 Caenorhabditis briggsae CBG06052 I 0.845
CBG07552 Caenorhabditis briggsae CBG07552 I 0.891
CBG15006 Caenorhabditis briggsae CBG15006 I 0.868
CBG17744 Caenorhabditis briggsae CBG17744 I 0.934
CBG19594 Caenorhabditis briggsae CBG19594 I 0.827
CBG19604 Caenorhabditis briggsae CBG19604 I 0.995
CBN07936 Caenorhabditis brenneri CBN07936 I 0.995
CBN08571 Caenorhabditis brenneri CBN08571 I 0.855
CBN10811 Caenorhabditis brenneri CBN10811 I 0.855
CBN13729 Caenorhabditis brenneri CBN13729 I 0.962
CBN18797 Caenorhabditis brenneri CBN18797 I 0.831
CBN19233 Caenorhabditis brenneri CBN19233 I 0.889
CBN20828 Caenorhabditis brenneri CBN20828 I 0.995
CBN26258 Caenorhabditis brenneri CBN26258 I 0.831
CBN31048 Caenorhabditis brenneri CBN31048 I 0.827
CJA04720 Caenorhabditis japonica CJA04720 I 0.995
CJA08328 Caenorhabditis japonica CJA08328 I 0.953
CJA13646 Caenorhabditis japonica CJA13646 I 0.887
CRE02711 Caenorhabditis remanei CRE02711 I 0.953
CRE06661 Caenorhabditis remanei CRE06661 I 0.827
CRE06667 Caenorhabditis remanei CRE06667 I 0.995
CRE09911 Caenorhabditis remanei CRE09911 I 0.868
CRE10161 Caenorhabditis remanei CRE10161 I 0.953
CRE12779 Caenorhabditis remanei CRE12779 I 0.844
CRE14116 Caenorhabditis remanei CRE14116 I 0.868
CRE15289 Caenorhabditis remanei CRE15289 I 0.891
EFV54558 Trichinella spiralis EFV54558 I 0.822
LOAG_01074 Loa loa LOAG_01074 I 0.953
LOAG_05485 Loa loa LOAG_05485 I 0.993
LOAG_18352 Loa loa LOAG_18352 I 0.897
PPA20304 Pristionchus pacificus PPA20304 I 0.874
PPA21285 Pristionchus pacificus PPA21285 I 0.989
Ppa-nhr-31 Pristionchus pacificus PPA24219 I 0.953
nhr-31 Caenorhabditis elegans WBGene00003625 I 0.953
nhr-88 Caenorhabditis elegans WBGene00003678 I 0.995
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.785
WBGene00241236 Onchocerca volvulus WBGene00241236 I 0.946
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.897
WBGene00248075 Onchocerca volvulus WBGene00248075 I 0.993
Minc01725 Meloidogyne incognita Minc01725 I 0.849
Minc13525 Meloidogyne incognita Minc13525 I 0.849
Minc15420 Meloidogyne incognita Minc15420 I 0.989
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.827
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.777
ACAC_0001180201 Angiostrongylus cantonensis ACAC_0001180201 I 0.993
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.827
ANCCAN_03474 Ancylostoma caninum ANCCAN_03474 I 0.945
ANCCAN_12539 Ancylostoma caninum ANCCAN_12539 I 0.994
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.897
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.827
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.831
ASIM_0001301101 Anisakis simplex ASIM_0001301101 I 0.766
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.836
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.904
ASU_01199 Ascaris suum ASU_01199 I 0.760
ASU_04305 Ascaris suum ASU_04305 I 0.953
ASU_10946 Ascaris suum ASU_10946 I 0.897
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.897
BTMF_0001198801 Brugia timori BTMF_0001198801 I 0.993
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.831
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.813
BXY_0179600 Bursaphelenchus xylophilus BXY_0179600 I 0.859
BXY_0740100 Bursaphelenchus xylophilus BXY_0740100 I 0.953
BXY_1595900 Bursaphelenchus xylophilus BXY_1595900 I 0.984
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.856
D917_06779 Trichinella nativa D917_06779 I 0.822
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.827
DICVIV_10822 Dictyocaulus viviparus DICVIV_10822 I 0.945
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.925
DME_0000188101 Dracunculus medinensis DME_0000188101 I 0.947
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.785
DME_0000960901 Dracunculus medinensis DME_0000960901 I 0.993
EVEC_0001115901 Enterobius vermicularis EVEC_0001115901 I 0.941
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.820
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.844
GPLIN_001106000 Globodera pallida GPLIN_001106000 I 0.908
GPUH_0000393501 Gongylonema pulchrum GPUH_0000393501 I 0.993
Hba_06510 Heterorhabditis bacteriophora Hba_06510 I 0.945
Hba_14163 Heterorhabditis bacteriophora Hba_14163 I 0.994
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.821
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.852
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.827
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.827
HCOI01716000 Haemonchus contortus HCOI01716000 I 0.945
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.897
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.827
HPLM_0001092501 Haemonchus placei HPLM_0001092501 I 0.945
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.827
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.776
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.859
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.801
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.883
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.991
L596_g3809 Steinernema carpocapsae L596_g3809 I 0.924
L889_g29204 Steinernema feltiae L889_g29204 I 0.991
L889_g5777 Steinernema feltiae L889_g5777 I 0.859
L889_g8361 Steinernema feltiae L889_g8361 I 0.802
L889_g8621 Steinernema feltiae L889_g8621 I 0.924
L892_g19201 Steinernema scapterisci L892_g19201 I 0.753
L892_g650 Steinernema scapterisci L892_g650 I 0.883
L893_g13285 Steinernema glaseri L893_g13285 I 0.777
L893_g27201 Steinernema glaseri L893_g27201 I 0.924
L893_g29388 Steinernema glaseri L893_g29388 I 0.859
L893_g29555 Steinernema glaseri L893_g29555 I 0.888
L893_g6878 Steinernema glaseri L893_g6878 I 0.993
L898_g10316 Steinernema monticolum L898_g10316 I 0.801
L898_g24498 Steinernema monticolum L898_g24498 I 0.859
L898_g2799 Steinernema monticolum L898_g2799 I 0.924
L898_g4801 Steinernema monticolum L898_g4801 I 0.991
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.849
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.849
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.820
nAv.1.0.1.g01698 Acanthocheilonema viteae nAv.1.0.1.g01698 I 0.993
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.897
NBR_0000170601 Nippostrongylus brasiliensis NBR_0000170601 I 0.995
NBR_0001013001 Nippostrongylus brasiliensis NBR_0001013001 I 0.945
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.785
nDi.2.2.2.g02781 Dirofilaria immitis nDi.2.2.2.g02781 I 0.993
nDi.2.2.2.g03563 Dirofilaria immitis nDi.2.2.2.g03563 I 0.950
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.897
NECAME_04545 Necator americanus NECAME_04545 I 0.897
NECAME_05125 Necator americanus NECAME_05125 I 0.994
NECAME_12696 Necator americanus NECAME_12696 I 0.827
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.898
nLs.2.1.2.g08709 Litomosoides sigmodontis nLs.2.1.2.g08709 I 0.993
nOo.2.0.1.g04046 Onchocerca ochengi nOo.2.0.1.g04046 I 0.993
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.897
nRc.2.0.1.g00257 Romanomermis culicivorax nRc.2.0.1.g00257 I 0.803
nRc.2.0.1.g16639 Romanomermis culicivorax nRc.2.0.1.g16639 I 0.762
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.827
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.897
OESDEN_12257 Oesophagostomum dentatum OESDEN_12257 I 0.945
OESDEN_17109 Oesophagostomum dentatum OESDEN_17109 I 0.994
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.897
OFLC_0001511801 Onchocerca flexuosa OFLC_0001511801 I 0.993
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.809
PTRK_0000207700 Parastrongyloides trichosuri PTRK_0000207700 I 0.945
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.766
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.843
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.991
PTRK_0000785300 Parastrongyloides trichosuri PTRK_0000785300 I 0.808
RSKR_0000832300 Rhabditophanes kr3021 RSKR_0000832300 I 0.927
SBAD_0000391501 Soboliphyme baturini SBAD_0000391501 I 0.845
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.989
scaffold601-EXSNAP2012.19 Pristionchus exspectatus scaffold601-EXSNAP2012.19 I 0.953
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.783
SMUV_0000212501 Syphacia muris SMUV_0000212501 I 0.941
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.880
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.827
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.849
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf24311-processed-gene-0.3 I 0.989
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.839
SPAL_0000620000 Strongyloides papillosus SPAL_0000620000 I 0.945
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.991
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.843
SPAL_0001690000 Strongyloides papillosus SPAL_0001690000 I 0.795
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.991
SSTP_0000433200 Strongyloides stercoralis SSTP_0000433200 I 0.806
SSTP_0000662400 Strongyloides stercoralis SSTP_0000662400 I 0.945
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.843
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.839
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.839
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.843
SVE_0662100 Strongyloides venezuelensis SVE_0662100 I 0.795
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.991
SVE_1965700 Strongyloides venezuelensis SVE_1965700 I 0.945
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.894
TCLT_0000173501 Thelazia callipaeda TCLT_0000173501 I 0.993
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.897
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.897
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.827
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.827
TMUE_s0002006800 Trichuris muris TMUE_s0002006800 I 0.785
CBG01439 Caenorhabditis briggsae CBG01439 N 0.757
CJA03362 Caenorhabditis japonica CJA03362 N 0.834
nhr-97 Caenorhabditis elegans WBGene00003687 N 0.867
ANCCAN_09370 Ancylostoma caninum ANCCAN_09370 N 0.907
ASIM_0000041701 Anisakis simplex ASIM_0000041701 N 0.791
augustus_masked-nMf.1.1.scaf06891-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06891-processed-gene-0.0 N 0.881
HCOI00878400 Haemonchus contortus HCOI00878400 N 0.876
HCOI02063000 Haemonchus contortus HCOI02063000 N 0.876
HCOI02063200 Haemonchus contortus HCOI02063200 N 0.876
HCOI02063400 Haemonchus contortus HCOI02063400 N 0.876
HCOI02063800 Haemonchus contortus HCOI02063800 N 0.876
HCOI02064100 Haemonchus contortus HCOI02064100 N 0.876
HPLM_0000127301 Haemonchus placei HPLM_0000127301 N 0.579
nOo.2.0.1.g02048 Onchocerca ochengi nOo.2.0.1.g02048 N 0.900
RSKR_0000862400 Rhabditophanes kr3021 RSKR_0000862400 N 0.788
RSKR_0000868400 Rhabditophanes kr3021 RSKR_0000868400 N 0.879
TCNE_0000088101 Toxocara canis TCNE_0000088101 N 0.804