CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0000640101
(
Haemonchus placei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
HPLM_0000640101
T308893_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0000640101-mRNA-1
Nuclear receptor
3
72
SPCAVCEMPSSGLHFGVSCCRACAAFFRRTLSLRLKYKCRFSRMCEVTQKKRYSCRYCRFEKCLMVGMKK
Links
Other
Nuclear receptor
family TFs
Other
Haemonchus placei
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_006432
Theobroma cacao
TCM_006432
I
0.000
Eucgr.G00615
Eucalyptus grandis
Eucgr.G00615
I
0.000
Ciclev10002029m.g
Citrus clementina
Ciclev10002029m.g
I
0.000
Gorai.002G207000
Gossypium raimondii
Gorai.002G207000
I
0.000
Gorai.005G259700
Gossypium raimondii
Gorai.005G259700
I
0.000
Cucsa.184670
Cucumis sativus
Cucsa.184670
I
0.000
29955.m001177
Ricinus communis
29955.m001177
I
0.000
Pm004043
Prunus mume
Pm004043
I
0.000
Cla000389
Citrullus lanatus
Cla000389
I
0.000
Solyc01g104650.2
Solanum lycopersicum
Solyc01g104650.2
I
0.000
PRUPE_ppa025544mg
Prunus persica
PRUPE_ppa025544mg
I
0.000
PGSC0003DMG400029774
Solanum tuberosum
PGSC0003DMG400029774
I
0.000
MTR_4g094390
Medicago truncatula
MTR_4g094390
I
0.000
MDP0000198495
Malus domestica
MDP0000198495
I
0.000
MDP0000706379
Malus domestica
MDP0000706379
I
0.000
chr4.CM0337.330.nc
Lotus japonicus
chr4.CM0337.330.nc
I
0.000
GLYMA05G25200
Glycine max
GLYMA05G25200
I
0.000
chr6.CM0314.840.nd
Lotus japonicus
chr6.CM0314.840.nd
N
0.000
gene11837-v1.0-hybrid
Fragaria vesca
gene11837-v1.0-hybrid
N
0.000
mgf020385m
Mimulus guttatus
mgf020385m
N
0.000
mgf009464m
Mimulus guttatus
mgf009464m
N
0.000
GSMUA_Achr9G08900_001
Musa acuminata
GSMUA_Achr9G08900_001
N
0.000
GLYMA15G05440
Glycine max
GLYMA15G05440
N
0.000
GLYMA08G19590
Glycine max
GLYMA08G19590
N
0.000
GLYMA08G08220
Glycine max
GLYMA08G08220
N
0.000