L596_g3812 (Steinernema carpocapsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L596_g3812 T309020_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.858 0.586
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.808 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g3812.t1 Nuclear receptor 57 126
L596_g3812.t2 Nuclear receptor 56 125

Links

Other Nuclear receptor family TFs
Other Steinernema carpocapsae TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-7 Caenorhabditis elegans WBGene00003606 D 0.858
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.808
L893_g29555 Steinernema glaseri L893_g29555 I 0.808
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.808
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.838
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.808
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.791
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.759
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.759
L898_g24498 Steinernema monticolum L898_g24498 I 0.918
L898_g23965 Steinernema monticolum L898_g23965 I 0.991
L898_g10316 Steinernema monticolum L898_g10316 I 0.800
L893_g32432 Steinernema glaseri L893_g32432 I 0.776
NECAME_12696 Necator americanus NECAME_12696 I 0.838
L893_g29388 Steinernema glaseri L893_g29388 I 0.918
L893_g27196 Steinernema glaseri L893_g27196 I 0.991
L892_g650 Steinernema scapterisci L892_g650 I 0.805
L892_g21738 Steinernema scapterisci L892_g21738 I 0.990
L889_g8361 Steinernema feltiae L889_g8361 I 0.800
L889_g6303 Steinernema feltiae L889_g6303 I 0.991
L889_g5777 Steinernema feltiae L889_g5777 I 0.921
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.805
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.800
L596_g20569 Steinernema carpocapsae L596_g20569 I 0.918
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.838
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.759
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.838
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.838
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.808
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.808
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.808
SVE_0301400 Strongyloides venezuelensis SVE_0301400 I 0.808
SVE_0137800 Strongyloides venezuelensis SVE_0137800 I 0.922
SSTP_0001234400 Strongyloides stercoralis SSTP_0001234400 I 0.922
SSTP_0000831700 Strongyloides stercoralis SSTP_0000831700 I 0.808
SPAL_0001436300 Strongyloides papillosus SPAL_0001436300 I 0.808
SPAL_0000110800 Strongyloides papillosus SPAL_0000110800 I 0.922
NECAME_04545 Necator americanus NECAME_04545 I 0.808
SMUV_0000859101 Syphacia muris SMUV_0000859101 I 0.907
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.813
PTRK_0000510500 Parastrongyloides trichosuri PTRK_0000510500 I 0.808
PTRK_0000497300 Parastrongyloides trichosuri PTRK_0000497300 I 0.867
PEQ_0000633601 Parascaris equorum PEQ_0000633601 I 0.896
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.808
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.808
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.838
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.808
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.810
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.838
CRE15289 Caenorhabditis remanei CRE15289 I 0.808
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.808
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.808
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.838
ACAC_0000409401 Angiostrongylus cantonensis ACAC_0000409401 I 0.881
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.838
Minc13525 Meloidogyne incognita Minc13525 I 0.759
Minc01725 Meloidogyne incognita Minc01725 I 0.759
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.808
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.839
PPA20304 Pristionchus pacificus PPA20304 I 0.772
LOAG_18352 Loa loa LOAG_18352 I 0.808
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.838
CRE12779 Caenorhabditis remanei CRE12779 I 0.853
CRE06661 Caenorhabditis remanei CRE06661 I 0.841
CJA13646 Caenorhabditis japonica CJA13646 I 0.808
CBN31048 Caenorhabditis brenneri CBN31048 I 0.841
CBN26258 Caenorhabditis brenneri CBN26258 I 0.858
CBN19233 Caenorhabditis brenneri CBN19233 I 0.812
CBN18797 Caenorhabditis brenneri CBN18797 I 0.858
CBG19594 Caenorhabditis briggsae CBG19594 I 0.841
CBG07552 Caenorhabditis briggsae CBG07552 I 0.808
CBG06052 Caenorhabditis briggsae CBG06052 I 0.858
Bm14724 Brugia malayi Bm14724 I 0.808
ASIM_0001301101 Anisakis simplex ASIM_0001301101 I 0.957
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.808
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.838
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.838
HCOI00435200 Haemonchus contortus HCOI00435200 I 0.875
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.832
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.791
genemark-nMf.1.1.scaf00140-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00140-processed-gene-0.6 I 0.758
EVEC_0000349901 Enterobius vermicularis EVEC_0000349901 I 0.784
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.816
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.838
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.791
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.761
BXY_0008800 Bursaphelenchus xylophilus BXY_0008800 I 0.890
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.808
ASU_10946 Ascaris suum ASU_10946 I 0.808
ASU_01199 Ascaris suum ASU_01199 I 0.957
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.800
ASIM_0001309901 Anisakis simplex ASIM_0001309901 I 0.826
ANCCEY_05105 Ancylostoma ceylanicum ANCCEY_05105 I 0.844
BXY_0740200 Bursaphelenchus xylophilus BXY_0740200 N 0.922
augustus_masked-nMf.1.1.scaf04518-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf04518-processed-gene-0.1 N 0.745
Minc15185 Meloidogyne incognita Minc15185 N 0.745
MhA1_Contig795.frz3.fgene1 Meloidogyne hapla MhA1_Contig795.frz3.fgene1 N 0.873