CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L898_g31745
(
Steinernema monticolum
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L898_g31745
T309490_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Esrrb
M00815_2.00
Mus musculus
NVAAGGTCRN
NYGACCTTBN
PBM
Weirauch et al.(2013)
pTH2311
0.746
0.391
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g31745.t1
Nuclear receptor
1
70
XLCVVCGDQADGNHYGVLSCRGCNAFFRRAVTFNMVFTCRRDGTCPINKNARCACRACRFKKCKVMGMDW
Links
Other
Nuclear receptor
family TFs
Other
Steinernema monticolum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Esrrb
Mus musculus
ENSMUSG00000021255
D
0.746
Bm12555
Brugia malayi
Bm12555
I
0.953
RXRA
Callithrix jacchus
ENSCJAG00000010148
I
0.863
NR2F1
Equus caballus
ENSECAG00000018508
I
0.882
NR6A1
Vicugna pacos
ENSVPAG00000009261
I
0.926
Brh_R011230
Buceros rhinoceros
Brh_R011230
I
0.952