CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf08489-snap-gene-0.4
(
Meloidogyne floridensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
maker-nMf.1.1.scaf08489-snap-gene-0.4
T309582_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf08489-snap-gene-0.4-mRNA-1
Nuclear receptor
7
89
KQCKVCGSKEKVCFHYGVCTCRACGAFFRRYLENENKCIYSECTYKCSQKQLPNENKGKKSETNLAKCKKCRLEKCLSVGMKK
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne floridensis
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
UPC2
Saccharomyces cerevisiae
YDR213W
D
SAKL0H13024g
Lachancea kluyveri
SAKL0H13024g
I
Kwal_3122
Kluyveromyces waltii
Kwal_3122
I
4533_YDR213W
Saccharomyces paradoxus
4533_YDR213W
I
4515_Multiple
Saccharomyces bayanus
4515_Multiple
I
4123_Multiple
Saccharomyces mikatae
4123_Multiple
I
Scas_Contig679.26
Saccharomyces castellii
Scas_Contig679.26
I
ZBAI_09613
Zygosaccharomyces bailii
ZBAI_09613
I
SU7_2615
Saccharomyces arboricola
SU7_2615
I
NDAI_0C04840
Naumovozyma dairenensis
NDAI_0C04840
I
NCAS_0C02730
Naumovozyma castellii
NCAS_0C02730
I
KNAG_0A02550
Kazachstania naganishii
KNAG_0A02550
I
KLTH0F07854g
Lachancea thermotolerans
KLTH0F07854g
I
TDEL_0F05470
Torulaspora delbrueckii
TDEL_0F05470
N
ZBAI_01680
Zygosaccharomyces bailii
ZBAI_01680
N
ZYRO0A09350g
Zygosaccharomyces rouxii
ZYRO0A09350g
N
LALA0_S12e02300g
Lachancea lanzarotensis
LALA0_S12e02300g
N
Kpol_529p15
Vanderwaltozyma polyspora
Kpol_529p15
N
CAGL0F07865g
Candida glabrata
CAGL0F07865g
N