MhA1_Contig1192.frz3.gene3 (Meloidogyne hapla)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 MhA1_Contig1192.frz3.gene3 T309623_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.863 0.500
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.788 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig1192.frz3.gene3 Nuclear receptor 40 109

Links

Other Nuclear receptor family TFs
Other Meloidogyne hapla TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_010_00478 Aquilegia coerulea Aquca_010_00478 N 0.000
PK13108.1 Cannabis sativa PK13108.1 N 0.000
SapurV1A.4211s0010 Salix purpurea SapurV1A.4211s0010 N 0.000
SapurV1A.1131s0040 Salix purpurea SapurV1A.1131s0040 N 0.000
SapurV1A.0254s0130 Salix purpurea SapurV1A.0254s0130 N 0.000
MDP0000575908 Malus domestica MDP0000575908 N 0.000
Lus10041740.g Linum usitatissimum Lus10041740.g N 0.000
Lus10024014.g Linum usitatissimum Lus10024014.g N 0.000
Gorai.008G068100 Gossypium raimondii Gorai.008G068100 N 0.000
Gorai.003G015400 Gossypium raimondii Gorai.003G015400 N 0.000
gene14780-v1.0-hybrid Fragaria vesca gene14780-v1.0-hybrid N 0.000
evm.TU.supercontig_6.108 Carica papaya evm.TU.supercontig_6.108 N 0.000
Eucgr.I02451 Eucalyptus grandis Eucgr.I02451 N 0.000
PGSC0003DMG400014900 Solanum tuberosum PGSC0003DMG400014900 N 0.000
mgf021185m Mimulus guttatus mgf021185m N 0.000
Cucsa.201400 Cucumis sativus Cucsa.201400 N 0.000
Cucsa.127390 Cucumis sativus Cucsa.127390 N 0.000
cassava35611.valid.m1 Manihot esculenta cassava35611.valid.m1 N 0.000
cassava18797.valid.m1 Manihot esculenta cassava18797.valid.m1 N 0.000
29634.m002156 Ricinus communis 29634.m002156 N 0.000
Pm026616 Prunus mume Pm026616 N 0.000
VIT_04s0023g01660 Vitis vinifera VIT_04s0023g01660 N 0.000
TCM_000399 Theobroma cacao TCM_000399 N 0.000
Solyc02g085340.1 Solanum lycopersicum Solyc02g085340.1 N 0.000
PRUPE_ppa003124mg Prunus persica PRUPE_ppa003124mg N 0.000
POPTR_0007s12760 Populus trichocarpa POPTR_0007s12760 N 0.000