MhA1_Contig984.frz3.gene20 (Meloidogyne hapla)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 MhA1_Contig984.frz3.gene20 T309679_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-7
M00689_2.00 		Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW		 PBM
Narasimhan et al.(2015)
pTH10645 		0.869 0.600
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.824 0.586
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig984.frz3.gene20 Nuclear receptor 45 114

Links

Other Nuclear receptor family TFs
Other Meloidogyne hapla TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OS07G0685700 Oryza sativa OS07G0685700 I 0.000
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.000
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.000
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.000
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.000
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.000
mgf012394m Mimulus guttatus mgf012394m I 0.000
29708.m000185 Ricinus communis 29708.m000185 I 0.000
Cla013874 Citrullus lanatus Cla013874 I 0.000
Cla011250 Citrullus lanatus Cla011250 I 0.000
Ca_10236 Cicer arietinum Ca_10236 I 0.000
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.000
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.000
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.000
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.000
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.000
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.000
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.000
OLONG_004360 Oryza longistaminata OLONG_004360 I 0.000
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.000
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.000
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.000
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.000
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.000
Bra035746 Brassica rapa Bra035746 I 0.000
Bo3g076180 Brassica oleracea Bo3g076180 I 0.000