nLs.2.1.2.g07694 (Litomosoides sigmodontis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nLs.2.1.2.g07694 T309842_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
daf-12
M00685_2.00 		Caenorhabditis elegans
NDAGTRCANN
NNTGYACTHN		 PBM
Narasimhan et al.(2015)
pTH9108 		0.906 0.873
daf-12
M08159_2.00 		Caenorhabditis elegans
GWGYGYGYKTGYDKB
VMHRCAMRCRCRCWC		 ChIP-seq
Mathelier et al.(2014)
MA0538.1 		0.906 0.873
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t07694-RA Nuclear receptor 157 211

Links

Other Nuclear receptor family TFs
Other Litomosoides sigmodontis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
daf-12 Caenorhabditis elegans WBGene00000908 D 0.906
RSKR_0001015700 Rhabditophanes kr3021 RSKR_0001015700 I 0.888
L596_g8771 Steinernema carpocapsae L596_g8771 I 0.911
L889_g10853 Steinernema feltiae L889_g10853 I 0.911
L892_g18386 Steinernema scapterisci L892_g18386 I 0.897
L893_g16225 Steinernema glaseri L893_g16225 I 0.898
L898_g10498 Steinernema monticolum L898_g10498 I 0.911
nAv.1.0.1.g08097 Acanthocheilonema viteae nAv.1.0.1.g08097 I 0.952
nDi.2.2.2.g09652 Dirofilaria immitis nDi.2.2.2.g09652 I 0.911
OFLC_0000598101 Onchocerca flexuosa OFLC_0000598101 I 0.911
PTRK_0001378700 Parastrongyloides trichosuri PTRK_0001378700 I 0.911
EVEC_0001257601 Enterobius vermicularis EVEC_0001257601 I 0.911
scaffold61-EXSNAP2012.64 Pristionchus exspectatus scaffold61-EXSNAP2012.64 I 0.906
SMUV_0001002101 Syphacia muris SMUV_0001002101 I 0.911
SPAL_0001591300 Strongyloides papillosus SPAL_0001591300 I 0.911
SSTP_0001172300 Strongyloides stercoralis SSTP_0001172300 I 0.911
SVE_0996600 Strongyloides venezuelensis SVE_0996600 I 0.911
TCLT_0000386701 Thelazia callipaeda TCLT_0000386701 I 0.911
TCNE_0000258801 Toxocara canis TCNE_0000258801 I 0.769
TELCIR_05516 Teladorsagia circumcincta TELCIR_05516 I 0.906
ACOC_0000064201 Angiostrongylus costaricensis ACOC_0000064201 I 0.906
CBG04512 Caenorhabditis briggsae CBG04512 I 0.906
CBN08904 Caenorhabditis brenneri CBN08904 I 0.749
CBN31767 Caenorhabditis brenneri CBN31767 I 0.906
CJA11532 Caenorhabditis japonica CJA11532 I 0.906
CRE07237 Caenorhabditis remanei CRE07237 I 0.906
LOAG_10538 Loa loa LOAG_10538 I 0.911
WBGene00239037 Onchocerca volvulus WBGene00239037 I 0.911
ACAC_0000565201 Angiostrongylus cantonensis ACAC_0000565201 I 0.906
WUBG_12640 Wuchereria bancrofti WUBG_12640 I 0.911
ANCCAN_15412 Ancylostoma caninum ANCCAN_15412 I 0.906
ANCCEY_01199 Ancylostoma ceylanicum ANCCEY_01199 I 0.906
ANCDUO_17434 Ancylostoma duodenale ANCDUO_17434 I 0.906
ASIM_0001146101 Anisakis simplex ASIM_0001146101 I 0.911
ASU_07898 Ascaris suum ASU_07898 I 0.911
BXY_1418300 Bursaphelenchus xylophilus BXY_1418300 I 0.911
CGOC_0000057501 Cylicostephanus goldi CGOC_0000057501 I 0.819
DME_0000943901 Dracunculus medinensis DME_0000943901 I 0.911