nOo.2.0.1.g05901 (Onchocerca ochengi)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nOo.2.0.1.g05901 T309863_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.992 0.929
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nOo.2.0.1.t05901-RA Nuclear receptor 176 245

Links

Other Nuclear receptor family TFs
Other Onchocerca ochengi TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G04410 Brachypodium distachyon BRADI3G04410 I 0.000
BRADI1G33550 Brachypodium distachyon BRADI1G33550 I 0.000
Pavir.Db00303 Panicum virgatum Pavir.Db00303 N 0.000
Sb10g028110 Sorghum bicolor Sb10g028110 N 0.000
OS06G0691100 Oryza sativa OS06G0691100 N 0.000
ORUFI06G27450 Oryza rufipogon ORUFI06G27450 N 0.000
ORGLA02G0040900 Oryza glaberrima ORGLA02G0040900 N 0.000
OPUNC06G23160 Oryza punctata OPUNC06G23160 N 0.000
ONIVA06G28540 Oryza nivara ONIVA06G28540 N 0.000
OMERI06G25700 Oryza meridionalis OMERI06G25700 N 0.000
OMERI02G05190 Oryza meridionalis OMERI02G05190 N 0.000
OGLUM06G26910 Oryza glumaepatula OGLUM06G26910 N 0.000
OGLUM02G04330 Oryza glumaepatula OGLUM02G04330 N 0.000
OBART06G25530 Oryza barthii OBART06G25530 N 0.000
OBART02G04420 Oryza barthii OBART02G04420 N 0.000
LPERR06G21240 Leersia perrieri LPERR06G21240 N 0.000
LPERR02G03850 Leersia perrieri LPERR02G03850 N 0.000
GRMZM2G322672 Zea mays GRMZM2G322672 N 0.000
GRMZM2G175543 Zea mays GRMZM2G175543 N 0.000
GRMZM2G052720 Zea mays GRMZM2G052720 N 0.000