AFUN002668 (Anopheles funestus)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 AFUN002668 T312398_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX7
M00346_2.00 		Homo sapiens
NGTYAYGSHN
NDSCRTRACN		 PBM
Barrera et al.(2016)
PAX7_REF 		0.838 0.838
PAX7
M00345_2.00 		Homo sapiens
NSGTCACGSN
NSCGTGACSN		 PBM
Barrera et al.(2016)
PAX7_P112L 		0.829 0.829
Pax5B
M01301_2.00 		Gallus gallus
NSNDTNNNN
NNNNAHNSN		 PBM
Lambert et al.(2019)
pTH9781 		0.714 0.714
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.714 0.714
PAX5
M03443_2.00 		Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY		 SELEX
Jolma et al.(2013)
PAX5_1 		0.714 0.714
PAX5
M08160_2.00 		Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY		 ChIP-seq
Mathelier et al.(2014)
MA0014.3 		0.714 0.714
PAX5
M07995_2.00 		Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha 		0.714 0.714
PAX5
M07996_2.00 		Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha 		0.714 0.714
PAX5
M07997_2.00 		Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG		 ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha 		0.714 0.714
PAX5
M07998_2.00 		Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha 		0.714 0.714
PAX5
M08227_2.00 		Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV		 ChIP-seq
Contrino et al.(2012)
Mv108 		0.714 0.714
PAX5
M08228_2.00 		Homo sapiens
AGCGTGRCYG
CRGYCACGCT		 ChIP-seq
Contrino et al.(2012)
Mv109 		0.714 0.714
PAX5
M09341_2.00 		Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS		 Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A 		0.714 0.714
Pax5
M09342_2.00 		Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB		 Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A 		0.714 0.714
PAX5
M09622_2.00 		Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1 		0.714 0.714
PAX5
M09623_2.00 		Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2 		0.714 0.714
PAX5
M11208_2.00 		Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV		 Transfac
Matys et al.(2006)
V$PAX5_01 		0.714 0.714
PAX5
M11209_2.00 		Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB		 Transfac
Matys et al.(2006)
V$PAX5_02 		0.714 0.714
PAX5
M11210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_06 		0.714 0.714
PAX5
M11211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_07 		0.714 0.714
PAX5
M11212_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_Q6 		0.714 0.714
pax2b
M02425_2.00 		Danio rerio
HVNYSRNSCR
YGSNYSRNBD		 PBM
Weirauch et al.(2014)
pTH8679 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AFUN002668-PA Paired box 22 126

Links

Other Paired box family TFs
Other Anopheles funestus TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAX6 Homo sapiens ENSG00000007372 D 0.704
PAX7 Homo sapiens ENSG00000009709 D 0.704
PAX3 Homo sapiens ENSG00000135903 D 0.712
Ogr15337 Ophisaurus gracilis Ogr15337 I 0.717
ACUA026425 Anopheles culicifacies ACUA026425 I 0.890
ACHR005005 Anopheles christyi ACHR005005 I 0.962
AARA010781 Anopheles arabiensis AARA010781 I 0.737
AALB001179 Anopheles albimanus AALB001179 I 0.757
SNAPOd2T00016386001 Oikopleura dioica SNAPOd2T00016386001 I 0.817
Sjc_0077510 Schistosoma japonicum Sjc_0077510 I 0.714
LCUP011796 Lucilia cuprina LCUP011796 I 0.881
HHAL001219-PA Halyomorpha halys HHAL001219-PA I 0.878
CLEC009745 Cimex lectularius CLEC009745 I 0.878
CLEC006621 Cimex lectularius CLEC006621 I 0.768
AFAF004706 Anopheles farauti AFAF004706 I 0.861
Ogr06456 Ophisaurus gracilis Ogr06456 I 0.721
Cmyd_10010530 Chelonia mydas Cmyd_10010530 I 0.704
Cflo_06473--XP_394848.3_APIME Camponotus floridanus Cflo_06473--XP_394848.3_APIME I 0.795
Alligator_sinensis_CCG007145.2 Alligator sinensis Alligator_sinensis_CCG007145.2 I 0.715
Alligator_sinensis_CCG007145.1 Alligator sinensis Alligator_sinensis_CCG007145.1 I 0.704
PAX3 Callithrix jacchus ENSCJAG00000012088 I 0.712
HPBE_0000479901 Heligmosomoides bakeri HPBE_0000479901 I 0.739
SROB_0000822501 Schistosoma rodhaini SROB_0000822501 I 0.774
SMTD_0001918101 Schistosoma mattheei SMTD_0001918101 I 0.758
SCUD_0000788801 Schistosoma curassoni SCUD_0000788801 I 0.738
SBAD_0001213701 Soboliphyme baturini SBAD_0001213701 I 0.768
PEQ_0000701201 Parascaris equorum PEQ_0000701201 I 0.833
OFLC_0000380401 Onchocerca flexuosa OFLC_0000380401 I 0.791
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.773
HPLM_0000491501 Haemonchus placei HPLM_0000491501 I 0.710
ADIR011362 Anopheles dirus ADIR011362 I 0.718
ANCCAN_01421 Ancylostoma caninum ANCCAN_01421 I 0.700
ALUE_0001653201 Ascaris lumbricoides ALUE_0001653201 I 0.771
ALUE_0000098101 Ascaris lumbricoides ALUE_0000098101 I 0.771
AQUA004184 Anopheles quadriannulatus AQUA004184 I 0.714
AMIN006553 Anopheles minimus AMIN006553 I 0.890
AMAM016481 Anopheles maculatus AMAM016481 I 0.916
Alligator_sinensis_CCG006492.1 Alligator sinensis Alligator_sinensis_CCG006492.1 I 0.704
AEPI004837 Anopheles epiroticus AEPI004837 I 0.718
CPIJ006494 Culex quinquefasciatus CPIJ006494 I 0.864
ENSONIG00000005161 Oreochromis niloticus ENSONIG00000005161 I 0.711
ENSMODG00000025571 Monodelphis domestica ENSMODG00000025571 I 0.704
ENSMEUG00000011758 Macropus eugenii ENSMEUG00000011758 I 0.737
ENSGMOG00000003366 Gadus morhua ENSGMOG00000003366 I 0.720
Pax7 Dipodomys ordii ENSDORG00000011854 I 0.704
DAPPUDRAFT_65647 Daphnia pulex DAPPUDRAFT_65647 I 0.759
CPIJ019791 Culex quinquefasciatus CPIJ019791 I 0.893
CPIJ009206 Culex quinquefasciatus CPIJ009206 I 0.732
PAX7 Procavia capensis ENSPCAG00000005303 I 0.704
ACEP15310 Atta cephalotes ACEP15310 I 0.916
ACEP15304 Atta cephalotes ACEP15304 I 0.830
CpipJ_CPIJ019791 Culex pipiens CpipJ_CPIJ019791 I 0.893
CpipJ_CPIJ009206 Culex pipiens CpipJ_CPIJ009206 I 0.732
CpipJ_CPIJ006494 Culex pipiens CpipJ_CPIJ006494 I 0.864
PAX3 Macaca mulatta ENSMMUG00000020409 I 0.712
pax6a Danio rerio ENSDARG00000103379 I 0.729
pax6b Danio rerio ENSDARG00000045936 I 0.719
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.764
SMAR015380 Strigamia maritima SMAR015380 I 0.752
SMAR008441 Strigamia maritima SMAR008441 I 0.768
SINV15897 Solenopsis invicta SINV15897 I 0.906
RPRC008887 Rhodnius prolixus RPRC008887 I 0.752
RPRC001180 Rhodnius prolixus RPRC001180 I 0.701
KGM_02686 Danaus plexippus KGM_02686 I 0.903
ISCW003096 Ixodes scapularis ISCW003096 I 0.911
GL14130 Drosophila persimilis FBgn0151735 I 0.736
PAX8 Vicugna pacos ENSVPAG00000003973 I 0.704
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.764
ENSTRUG00000007849 Takifugu rubripes ENSTRUG00000007849 I 0.720
ENSTNIG00000013141 Tetraodon nigroviridis ENSTNIG00000013141 I 0.719
ENSTNIG00000005618 Tetraodon nigroviridis ENSTNIG00000005618 I 0.720
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.764
PAX9 Pteropus vampyrus ENSPVAG00000003728 I 0.717
ADIR009743 Anopheles dirus ADIR009743 N 0.761
Hba_09392 Heterorhabditis bacteriophora Hba_09392 N 0.714
ASIS007645 Anopheles sinensis ASIS007645 N 0.700
AALB001246 Anopheles albimanus AALB001246 N 0.778
YQE_12759 Dendroctonus ponderosae YQE_12759 N 0.733