Bostr.0556s0005 (Boechera stricta)
PLATZ

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04640 (PLATZ) IPR006734 Bostr.0556s0005 T315952_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G01818
M07247_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT2G01818_col_a 		0.910 0.910
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.0556s0005.1.p PLATZ 67 144

Links

Other PLATZ family TFs
Other Boechera stricta TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb09g006220 Sorghum bicolor Sb09g006220 N
ONIVA01G22870 Oryza nivara ONIVA01G22870 N
OPUNC01G05940 Oryza punctata OPUNC01G05940 N
OPUNC01G20610 Oryza punctata OPUNC01G20610 N
ORGLA01G0058200 Oryza glaberrima ORGLA01G0058200 N
ORGLA01G0397100 Oryza glaberrima ORGLA01G0397100 N
ORGLA08G0199700 Oryza glaberrima ORGLA08G0199700 N
ORUFI01G22920 Oryza rufipogon ORUFI01G22920 N
OS01G0195801 Oryza sativa OS01G0195801 N
OS01G0196300 Oryza sativa OS01G0196300 N
OS01G0575200 Oryza sativa OS01G0575200 N
Sb03g002910 Sorghum bicolor Sb03g002910 N
Sb03g025860 Sorghum bicolor Sb03g025860 N
ONIVA01G07190 Oryza nivara ONIVA01G07190 N
Si001328m.g Setaria italica Si001328m.g N
Si001494m.g Setaria italica Si001494m.g N
Traes_3AS_037375C84 Triticum aestivum Traes_3AS_037375C84 N
TRAES3BF047700010CFD_g Triticum aestivum TRAES3BF047700010CFD_g N
TRAES3BF075700010CFD_g Triticum aestivum TRAES3BF075700010CFD_g N
TRAES3BF076600020CFD_g Triticum aestivum TRAES3BF076600020CFD_g N
TRIUR3_35423 Triticum urartu TRIUR3_35423 N
Pavir.Ba03537 Panicum virgatum Pavir.Ba03537 N
Pavir.Ea00369 Panicum virgatum Pavir.Ea00369 N
Pavir.Ea01566 Panicum virgatum Pavir.Ea01566 N
Pavir.Eb00279 Panicum virgatum Pavir.Eb00279 N
Pavir.Eb01823 Panicum virgatum Pavir.Eb01823 N
MLOC_70258 Hordeum vulgare MLOC_70258 N
BGIOSGA002943 Oryza indica BGIOSGA002943 N
BGIOSGA003814 Oryza indica BGIOSGA003814 N
BRADI2G05950 Brachypodium distachyon BRADI2G05950 N
BRADI2G41670 Brachypodium distachyon BRADI2G41670 N
F775_21644 Aegilops tauschii F775_21644 N
GRMZM2G132550 Zea mays GRMZM2G132550 N
GRMZM2G333582 Zea mays GRMZM2G333582 N
GRMZM2G397755 Zea mays GRMZM2G397755 N
GRMZM5G849600 Zea mays GRMZM5G849600 N
LPERR01G05820 Leersia perrieri LPERR01G05820 N
LPERR01G17450 Leersia perrieri LPERR01G17450 N
MLOC_21524 Hordeum vulgare MLOC_21524 N
BGIOSGA002940 Oryza indica BGIOSGA002940 N
OB01G16120 Oryza brachyantha OB01G16120 N
OB01G30040 Oryza brachyantha OB01G30040 N
OBART01G06120 Oryza barthii OBART01G06120 N
OBART01G06170 Oryza barthii OBART01G06170 N
OBART01G20310 Oryza barthii OBART01G20310 N
OGLUM01G06690 Oryza glumaepatula OGLUM01G06690 N
OGLUM01G06730 Oryza glumaepatula OGLUM01G06730 N
OGLUM01G23890 Oryza glumaepatula OGLUM01G23890 N
OLONG_006433 Oryza longistaminata OLONG_006433 N
OMERI01G06310 Oryza meridionalis OMERI01G06310 N
OMERI01G18730 Oryza meridionalis OMERI01G18730 N
ONIVA01G07080 Oryza nivara ONIVA01G07080 N