CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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REL
(
Canis familiaris
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSCAFG00000002981
T317049_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
REL
M02710_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
SELEX
Mathelier et al.(2014)
MA0101.1
0.976
0.976
REL
M09350_2.00
Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B
0.976
0.976
REL
M11235_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
Transfac
Matys et al.(2006)
V$CREL_01
0.976
0.976
REL
M11236_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREL_Q6
0.976
0.976
Rel
M09353_2.00
Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A
0.947
0.947
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000004425
Rel
10
178
IEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAIISRIRAGINPFNVPEQQLLDIEDCDLNVVRLCFQVFLPDEHGNLTTALPPVVSNPIYDN
Links
Other
Rel
family TFs
Other
Canis familiaris
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA02G0337900
Oryza glaberrima
ORGLA02G0337900
N
Pavir.J04759
Panicum virgatum
Pavir.J04759
N
Pavir.J01346
Panicum virgatum
Pavir.J01346
N
Pavir.J00689
Panicum virgatum
Pavir.J00689
N
Si023448m.g
Setaria italica
Si023448m.g
N
Si007412m.g
Setaria italica
Si007412m.g
N
Sb10g030400
Sorghum bicolor
Sb10g030400
N
Sb04g038600
Sorghum bicolor
Sb04g038600
N
OS02G0833600
Oryza sativa
OS02G0833600
N
ORUFI02G40230
Oryza rufipogon
ORUFI02G40230
N
BGIOSGA005293
Oryza indica
BGIOSGA005293
N
OPUNC02G35740
Oryza punctata
OPUNC02G35740
N
ONIVA02G41380
Oryza nivara
ONIVA02G41380
N
OMERI02G36320
Oryza meridionalis
OMERI02G36320
N
OBART02G38520
Oryza barthii
OBART02G38520
N
OB02G45490
Oryza brachyantha
OB02G45490
N
LPERR02G31960
Leersia perrieri
LPERR02G31960
N
GRMZM2G073892
Zea mays
GRMZM2G073892
N
BRADI1G29920
Brachypodium distachyon
BRADI1G29920
N