CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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REL
(
Choloepus hoffmanni
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSCHOG00000010935
T317062_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
REL
M02710_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
SELEX
Mathelier et al.(2014)
MA0101.1
0.942
0.942
REL
M09350_2.00
Homo sapiens
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_HUMAN.H11MO.0.B
0.942
0.942
REL
M11235_2.00
Homo sapiens
BGGRNWTTCC
GGAAWNYCCV
Transfac
Matys et al.(2006)
V$CREL_01
0.942
0.942
REL
M11236_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREL_Q6
0.942
0.942
Rel
M09353_2.00
Mus musculus
TGKVMTTYCCCHDBH
DVHDGGGRAAKBMCA
Misc
Kulakovskiy et al.(2013)
REL_MOUSE.H11MO.0.A
0.916
0.916
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000009678
Rel
6
163
IEITEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQYCGKGKVRITLVTKNDPYKPHPHDLVGKDCRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAVVSRIRAGINPFSVPEQQLLDIEDCDLNVVRLCFQVFLPDEHGNLTTAXXXX
Links
Other
Rel
family TFs
Other
Choloepus hoffmanni
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CLUG_03610
Candida lusitaniae
CLUG_03610
I
0.000
PGUG_04779
Candida guilliermondii
PGUG_04779
I
0.000
SPPG_01116
Spizellomyces punctatus
SPPG_01116
I
0.000
SPPG_05445
Spizellomyces punctatus
SPPG_05445
I
0.000
AACERI_AaceriAFR136C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFR136C
I
0.000
AGOS_AFR136C
Ashbya gossypii
AGOS_AFR136C
I
0.000
BN7_3380
Wickerhamomyces ciferrii
BN7_3380
I
0.000
CANTEDRAFT_132848
Candida tenuis
CANTEDRAFT_132848
I
0.000
CaO19.454
Candida albicans
CaO19.454
I
0.000
CaO19.8085
Candida albicans
CaO19.8085
I
0.000
CLUG_03610
Clavispora lusitaniae
CLUG_03610
I
0.000
CTRG_00655
Candida tropicalis
CTRG_00655
I
0.000
DEHA2G10560g
Debaryomyces hansenii
DEHA2G10560g
I
0.000
DEHA2G20636g
Debaryomyces hansenii
DEHA2G20636g
I
0.000
DRE_06964
Drechslerella stenobrocha
DRE_06964
I
0.000
E5Q_05471
Mixia osmundae
E5Q_05471
I
0.000
Ecym_2312
Eremothecium cymbalariae
Ecym_2312
I
0.000
ENSLACG00000010304
Latimeria chalumnae
ENSLACG00000010304
I
0.000
HSF4
Loxodonta africana
ENSLAFG00000021984
I
0.000
G210_0510
Candida maltosa
G210_0510
I
0.000
G647_06910
Cladophialophora carrionii
G647_06910
I
0.000
GNLVRS01_PISO0E07748g
Millerozyma farinosa
GNLVRS01_PISO0E07748g
I
0.000
GNLVRS01_PISO0F09091g
Millerozyma farinosa
GNLVRS01_PISO0F09091g
I
0.000
HPODL_00954
Ogataea parapolymorpha
HPODL_00954
I
0.000
K437DRAFT_224239
Tilletiaria anomala
K437DRAFT_224239
I
0.000
KLLA0_E03191g
Kluyveromyces lactis
KLLA0_E03191g
I
0.000
KLTH0F14982g
Lachancea thermotolerans
KLTH0F14982g
I
0.000
KUCA_T00005449001
Kuraishia capsulata
KUCA_T00005449001
I
0.000
NCAS_0E03870
Naumovozyma castellii
NCAS_0E03870
I
0.000
NCAS_0H02280
Naumovozyma castellii
NCAS_0H02280
I
0.000
NDAI_0C01380
Naumovozyma dairenensis
NDAI_0C01380
I
0.000
PFICI_09422
Pestalotiopsis fici
PFICI_09422
I
0.000
PGUG_04779
Meyerozyma guilliermondii
PGUG_04779
I
0.000
PICST_68146
Scheffersomyces stipitis
PICST_68146
I
0.000
RHTO_01429
Rhodosporidium toruloides
RHTO_01429
I
0.000
RTG_02995
Rhodotorula glutinis
RTG_02995
I
0.000
SNOG_08309
Phaeosphaeria nodorum
SNOG_08309
I
0.000
TDEL_0A03400
Torulaspora delbrueckii
TDEL_0A03400
I
0.000
WALSEDRAFT_67781
Wallemia sebi
WALSEDRAFT_67781
I
0.000
YALI0_D04785g
Yarrowia lipolytica
YALI0_D04785g
I
0.000
ZBAI_09477
Zygosaccharomyces bailii
ZBAI_09477
I
0.000
ZYRO0D11286g
Zygosaccharomyces rouxii
ZYRO0D11286g
I
0.000
estExt_fgenesh1_pg.C_chr_6.10474
Pichia stipitis
estExt_fgenesh1_pg.C_chr_6.10474
I
0.000
fgeneshMC_pg.4_#_769
Mucor circinelloides
fgeneshMC_pg.4_#_769
I
0.000
Scas_Contig645.15
Saccharomyces castellii
Scas_Contig645.15
I
0.000
Scas_Contig714.29
Saccharomyces castellii
Scas_Contig714.29
I
0.000
KLTH0F14982g
Kluyveromyces thermotolerans
KLTH0F14982g
I
0.000
Kwal_21254
Kluyveromyces waltii
Kwal_21254
I
0.000
SAKL0G03586g
Lachancea kluyveri
SAKL0G03586g
I
0.000
CIMG_08549
Coccidioides immitis
CIMG_08549
N
0.000
CPAG_02000
Candida parapsilosis
CPAG_02000
N
0.000
CPAG_04153
Candida parapsilosis
CPAG_04153
N
0.000
MCYG_02334
Microsporum canis
MCYG_02334
N
0.000
PGUG_03027
Candida guilliermondii
PGUG_03027
N
0.000
RO3G_08485
Rhizopus oryzae
RO3G_08485
N
0.000
SNOG_08309
Stagonospora nodorum
SNOG_08309
N
0.000
VDBG_05547
Verticillium albo atrum
VDBG_05547
N
0.000
A1O3_01459
Capronia epimyces
A1O3_01459
N
0.000
A1O5_07765
Cladophialophora psammophila
A1O5_07765
N
0.000
A1O7_05617
Cladophialophora yegresii
A1O7_05617
N
0.000
A1O9_03914
Exophiala aquamarina
A1O9_03914
N
0.000
ACRE_057790
Acremonium chrysogenum
ACRE_057790
N
0.000
AOL_s00043g47
Arthrobotrys oligospora
AOL_s00043g47
N
0.000
ARB_06070
Arthroderma benhamiae
ARB_06070
N
0.000
AUEXF2481DRAFT_4075
Aureobasidium subglaciale
AUEXF2481DRAFT_4075
N
0.000
BAUCODRAFT_151200
Baudoinia compniacensis
BAUCODRAFT_151200
N
0.000
BBA_04216
Beauveria bassiana
BBA_04216
N
0.000
Bcin02g02960
Botrytis cinerea
Bcin02g02960
N
0.000
BDDG_07871
Blastomyces dermatitidis
BDDG_07871
N
0.000
BGHDH14_bgh06000
Blumeria graminis
BGHDH14_bgh06000
N
0.000
BN7_4359
Wickerhamomyces ciferrii
BN7_4359
N
0.000
CADAFLAG00013433
Aspergillus flavus
CADAFLAG00013433
N
0.000
AFUA_4G04502
Aspergillus fumigatus
CADAFUAG00001430
N
0.000
CADANGAG00010969
Aspergillus niger
CADANGAG00010969
N
0.000
CADAORAG00012206
Aspergillus oryzae
CADAORAG00012206
N
0.000
ATEG_02742
Aspergillus terreus
CADATEAG00003788
N
0.000
NFIA_028860
Neosartorya fischeri
CADNFIAG00002767
N
0.000
CCM_02465
Cordyceps militaris
CCM_02465
N
0.000
CD36_31370
Candida dubliniensis
CD36_31370
N
0.000
CFIO01_04547
Colletotrichum fioriniae
CFIO01_04547
N
0.000
CGGC5_1651
Colletotrichum gloeosporioides
CGGC5_1651
N
0.000
CH063_04335
Colletotrichum higginsianum
CH063_04335
N
0.000
CMQ_3588
Grosmannia clavigera
CMQ_3588
N
0.000
Cob_03924
Colletotrichum orbiculare
Cob_03924
N
0.000
COCC4DRAFT_137933
Bipolaris maydis
COCC4DRAFT_137933
N
0.000
COCCADRAFT_23204
Bipolaris zeicola
COCCADRAFT_23204
N
0.000
COCMIDRAFT_90826
Bipolaris oryzae
COCMIDRAFT_90826
N
0.000
COCSADRAFT_237465
Bipolaris sorokiniana
COCSADRAFT_237465
N
0.000
COCVIDRAFT_100540
Bipolaris victoriae
COCVIDRAFT_100540
N
0.000
CORT_0F01150
Candida orthopsilosis
CORT_0F01150
N
0.000
CPC735_062070
Coccidioides posadasii
CPC735_062070
N
0.000
CPUR_00409
Claviceps purpurea
CPUR_00409
N
0.000
CSUB01_10826
Colletotrichum sublineola
CSUB01_10826
N
0.000
DOTSEDRAFT_73714
Dothistroma septosporum
DOTSEDRAFT_73714
N
0.000
EPUS_01915
Endocarpon pusillum
EPUS_01915
N
0.000
EURHEDRAFT_462177
Aspergillus ruber
EURHEDRAFT_462177
N
0.000
EV44_g0556
Erysiphe necator
EV44_g0556
N
0.000
F503_06440
Ophiostoma piceae uamh
F503_06440
N
0.000
FFUJ_08331
Fusarium fujikuroi
FFUJ_08331
N
0.000
FGRRES_10868
Fusarium graminearum
FGRRES_10868
N
0.000
FOXG_12803
Fusarium oxysporum
FOXG_12803
N
0.000
FPSE_09836
Fusarium pseudograminearum
FPSE_09836
N
0.000
FVEG_11544
Fusarium verticillioides
FVEG_11544
N
0.000
GGTG_10719
Gaeumannomyces graminis
GGTG_10719
N
0.000
GLRG_05271
Colletotrichum graminicola
GLRG_05271
N
0.000
GMDG_00035
Pseudogymnoascus destructans
GMDG_00035
N
0.000
GNLVRS01_PISO0A02134g
Millerozyma farinosa
GNLVRS01_PISO0A02134g
N
0.000
GNLVRS01_PISO0B02289g
Millerozyma farinosa
GNLVRS01_PISO0B02289g
N
0.000
GSTUM_00004466001
Tuber melanosporum
GSTUM_00004466001
N
0.000
H072_3239
Dactylellina haptotyla
H072_3239
N
0.000
H101_00214
Trichophyton interdigitale
H101_00214
N
0.000
H102_03074
Trichophyton rubrum
H102_03074
N
0.000
H105_03092
Trichophyton soudanense
H105_03092
N
0.000
HCBG_08291
Histoplasma capsulatum
HCBG_08291
N
0.000
HMPREF1120_08552
Exophiala dermatitidis
HMPREF1120_08552
N
0.000
HMPREF1541_00864
Cyphellophora europaea
HMPREF1541_00864
N
0.000
HMPREF1624_03486
Sporothrix schenckii
HMPREF1624_03486
N
0.000
KNAG_0K00470
Kazachstania naganishii
KNAG_0K00470
N
0.000
LEMA_P076740.1
Leptosphaeria maculans
LEMA_P076740.1
N
0.000
M437DRAFT_56721
Aureobasidium melanogenum
M437DRAFT_56721
N
0.000
M438DRAFT_272047
Aureobasidium pullulans
M438DRAFT_272047
N
0.000
M7I_3486
Glarea lozoyensis
M7I_3486
N
0.000
MAJ_01594
Metarhizium majus
MAJ_01594
N
0.000
MAM_02919
Metarhizium album
MAM_02919
N
0.000
MANI_027126
Metarhizium anisopliae
MANI_027126
N
0.000
MAPG_00013
Magnaporthe poae
MAPG_00013
N
0.000
MBM_05529
Marssonina brunnea
MBM_05529
N
0.000
MBR_04590
Metarhizium brunneum
MBR_04590
N
0.000
MGG_06971
Magnaporthe oryzae
MGG_06971
N
0.000
MGU_04157
Metarhizium guizhouense
MGU_04157
N
0.000
MGYG_07335
Microsporum gypseum
MGYG_07335
N
0.000
MPH_02552
Macrophomina phaseolina
MPH_02552
N
0.000
MYCFIDRAFT_146678
Pseudocercospora fijiensis
MYCFIDRAFT_146678
N
0.000
Mycgr3G38379
Zymoseptoria tritici
Mycgr3G38379
N
0.000
MYCTH_2312138
Myceliophthora thermophila
MYCTH_2312138
N
0.000
NechaG40194
Fusarium solani
NechaG40194
N
0.000
OCS_04575
Ophiocordyceps sinensis
OCS_04575
N
0.000
OIDMADRAFT_181379
Oidiodendron maius
OIDMADRAFT_181379
N
0.000
PAAG_01459
Paracoccidioides sp lutzii
PAAG_01459
N
0.000
PABG_01939
Paracoccidioides brasiliensis
PABG_01939
N
0.000
PCH_Pc13g06670
Penicillium rubens
PCH_Pc13g06670
N
0.000
PDE_05764
Penicillium oxalicum
PDE_05764
N
0.000
PDIP_15740
Penicillium digitatum
PDIP_15740
N
0.000
PEX1_020890
Penicillium expansum
PEX1_020890
N
0.000
PFL1_03124
Pseudozyma flocculosa
PFL1_03124
N
0.000
PGUG_03027
Meyerozyma guilliermondii
PGUG_03027
N
0.000
PHSY_000528
Pseudozyma hubeiensis
PHSY_000528
N
0.000
PICST_66881
Scheffersomyces stipitis
PICST_66881
N
0.000
PMAA_085950
Talaromyces marneffei
PMAA_085950
N
0.000
PODANS_3_7650
Podospora anserina
PODANS_3_7650
N
0.000
PSEUBRA_SCAF16g05334
Pseudozyma brasiliensis
PSEUBRA_SCAF16g05334
N
0.000
PTRG_08428
Pyrenophora triticirepentis
PTRG_08428
N
0.000
PTT_06554
Pyrenophora teres
PTT_06554
N
0.000
PV04_05986
Capronia semiimmersa
PV04_05986
N
0.000
PV05_05603
Exophiala xenobiotica
PV05_05603
N
0.000
PV06_00857
Exophiala oligosperma
PV06_00857
N
0.000
PV07_04143
Cladophialophora immunda
PV07_04143
N
0.000
PV08_00880
Exophiala spinifera
PV08_00880
N
0.000
PV09_01119
Verruconis gallopava
PV09_01119
N
0.000
PV10_07698
Exophiala mesophila
PV10_07698
N
0.000
PV11_00595
Exophiala sideris
PV11_00595
N
0.000
PVAR5_3532
Byssochlamys spectabilis
PVAR5_3532
N
0.000
S40285_02996
Stachybotrys chlorohalonata
S40285_02996
N
0.000
S40288_00568
Stachybotrys chartarum
S40288_00568
N
0.000
SAPIO_CDS6018
Scedosporium apiospermum
SAPIO_CDS6018
N
0.000
SBOR_3380
Sclerotinia borealis
SBOR_3380
N
0.000
SEPMUDRAFT_47596
Sphaerulina musiva
SEPMUDRAFT_47596
N
0.000
SETTUDRAFT_34274
Setosphaeria turcica
SETTUDRAFT_34274
N
0.000
SMAC_00003
Sordaria macrospora
SMAC_00003
N
0.000
SPBR_01490
Sporothrix brasiliensis
SPBR_01490
N
0.000
sr13089
Sporisorium reilianum
sr13089
N
0.000
SS1G_01646
Sclerotinia sclerotiorum
SS1G_01646
N
0.000
TEQG_06289
Trichophyton equinum
TEQG_06289
N
0.000
TESG_06359
Trichophyton tonsurans
TESG_06359
N
0.000
THITE_2123849
Thielavia terrestris
THITE_2123849
N
0.000
TRIATDRAFT_174226
Trichoderma atroviride
TRIATDRAFT_174226
N
0.000
TRIREDRAFT_27357
Trichoderma reesei
TRIREDRAFT_27357
N
0.000
TRIVIDRAFT_125026
Trichoderma virens
TRIVIDRAFT_125026
N
0.000
TRV_00290
Trichophyton verrucosum
TRV_00290
N
0.000
TSTA_121070
Talaromyces stipitatus
TSTA_121070
N
0.000
U727_0043017041
Penicillium solitum
U727_0043017041
N
0.000
UCREL1_4627
Eutypa lata
UCREL1_4627
N
0.000
UCRPA7_905
Togninia minima
UCRPA7_905
N
0.000
UHOR_03142
Ustilago hordei
UHOR_03142
N
0.000
UM05182
Ustilago maydis
UM05182
N
0.000
UREG_02611
Uncinocarpus reesii
UREG_02611
N
0.000
UV8b_4500
Ustilaginoidea virens
UV8b_4500
N
0.000
V499_07683
Pseudogymnoascus pannorum
V499_07683
N
0.000
VDAG_07492
Verticillium dahliae
VDAG_07492
N
0.000
VDBG_05547
Verticillium alfalfae
VDBG_05547
N
0.000
VHEMI09490
Torrubiella hemipterigena
VHEMI09490
N
0.000
W97_04615
Coniosporium apollinis
W97_04615
N
0.000
X797_007282
Metarhizium robertsii
X797_007282
N
0.000
Z517_00530
Fonsecaea pedrosoi
Z517_00530
N
0.000
Z518_08730
Rhinocladiella mackenziei
Z518_08730
N
0.000
Z519_07578
Cladophialophora bantiana
Z519_07578
N
0.000
e_gw1.12.536.1
Nectria haematococca
e_gw1.12.536.1
N
0.000
e_gw1.3.1300.1
Mycosphaerella graminicola
e_gw1.3.1300.1
N
0.000
e_gw1.5.1289.1
Mucor circinelloides
e_gw1.5.1289.1
N
0.000
estExt_fgenesh2_pg.C_100130
Neurospora discreta
estExt_fgenesh2_pg.C_100130
N
0.000
estExt_Genewise1.C_280011
Phycomyces blakesleeanus
estExt_Genewise1.C_280011
N
0.000
estExt_Genewise1Plus.C_50691
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_50691
N
0.000
gw1.18.319.1
Mycosphaerella fijiensis
gw1.18.319.1
N
0.000
hsf-2
Neurospora crassa
NCU08480
N
0.000
estExt_Genewise1Plus.C_21911
Cryphonectria parasitica
estExt_Genewise1Plus.C_21911
N
0.000
fgenesh1_pg.00795_#_26
Aspergillus carbonarius
fgenesh1_pg.00795_#_26
N
0.000
Pc13g06670
Penicillium chrysogenum
Pc13g06670
N
0.000
PMAA_085950
Penicillium marneffei
PMAA_085950
N
0.000