ENSOPRG00000010827 (Ochotona princeps)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSOPRG00000010827 T317383_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RELA
M02711_2.00 		Homo sapiens
SGGRVTTTCC
GGAAABYCCS		 SELEX
Mathelier et al.(2014)
MA0107.1 		0.992 0.992
RELA
M07999_2.00 		Homo sapiens
DGGGRMTTTCCMVN
NBKGGAAAKYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM10847_NFKB_Stanford 		0.992 0.992
RELA
M08000_2.00 		Homo sapiens
NDGGGRMWTTCCHN
NDGGAAWKYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM12878_NFKB_Stanford 		0.992 0.992
RELA
M08001_2.00 		Homo sapiens
NDGGGRMTTTCCMVN
NBKGGAAAKYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM12891_NFKB_Stanford 		0.992 0.992
RELA
M08002_2.00 		Homo sapiens
DGGGRHTTTCCMVNN
NNBKGGAAADYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM12892_NFKB_Stanford 		0.992 0.992
RELA
M08003_2.00 		Homo sapiens
DGGGRVTTTCCHVN
NBDGGAAABYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM15510_NFKB_Stanford 		0.992 0.992
RELA
M08004_2.00 		Homo sapiens
NDGGGRMTTTCCMNN
NNKGGAAAKYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM18505_NFKB_Stanford 		0.992 0.992
RELA
M08005_2.00 		Homo sapiens
NDGGGRHTTTCCMVN
NBKGGAAADYCCCHN		 ChIP-seq
Gerstein et al.(2012)
GM18526_NFKB_Stanford 		0.992 0.992
RELA
M08006_2.00 		Homo sapiens
GGGRVTTTCCM
KGGAAABYCCC		 ChIP-seq
Gerstein et al.(2012)
GM18951_NFKB_Stanford 		0.992 0.992
RELA
M08007_2.00 		Homo sapiens
DGGGRMTTTCCMV
BKGGAAAKYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM19099_NFKB_Stanford 		0.992 0.992
RELA
M08008_2.00 		Homo sapiens
DGGGRMTTTCCMNNN
NNNKGGAAAKYCCCH		 ChIP-seq
Gerstein et al.(2012)
GM19193_NFKB_Stanford 		0.992 0.992
RELA
M09351_2.00 		Homo sapiens
NWGGGRHWTTCCMV
BKGGAAWDYCCCWN		 Misc
Kulakovskiy et al.(2013)
TF65_HUMAN.H11MO.0.A 		0.992 0.992
RELA
M09626_2.00 		Homo sapiens
DGGGRVWTTCCM
KGGAAWBYCCCH		 Misc
Heinz et al.(2010)
GM12787-p65_GSE19485 		0.992 0.992
RELA
M11237_2.00 		Homo sapiens
BGGRVTTTCC
GGAAABYCCV		 Transfac
Matys et al.(2006)
V$NFKAPPAB65_01 		0.992 0.992
RELA
M11238_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_02 		0.992 0.992
RELA
M11239_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_03 		0.992 0.992
RELA
M11240_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_04 		0.992 0.992
RELA
M11241_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_05 		0.992 0.992
RELA
M11242_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RELA_Q6 		0.992 0.992
Rela
M08039_2.00 		Mus musculus
DGGRVTTTCCM
KGGAAABYCCH		 ChIP-seq
Chen et al.(2011)
SRP001843_p65_Input_LPSstim 		0.959 0.959
Rela
M08038_2.00 		Mus musculus
HHYYYCYYNYHYYYNHYYYYCYWNNSYTBY
RVARSNNWRGRRRRDNRRRDRNRRGRRRDD		 ChIP-seq
Chen et al.(2011)
SRP001843_p65_Input 		0.959 0.959
Rela
M09355_2.00 		Mus musculus
KGGRVTTYCCM
KGGRAABYCCM		 Misc
Kulakovskiy et al.(2013)
TF65_MOUSE.H11MO.0.A 		0.959 0.959
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000009895 Rel 21 152

Links

Other Rel family TFs
Other Ochotona princeps TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
dl Drosophila melanogaster FBgn0260632 D 0.000
GG21746 Drosophila erecta FBgn0113924 I 0.000
AMIN001887 Anopheles minimus AMIN001887 I 0.000
AATE006484 Anopheles atroparvus AATE006484 I 0.000
AARA011865 Anopheles arabiensis AARA011865 I 0.000
LCUP010246 Lucilia cuprina LCUP010246 I 0.000
GB44031 Apis mellifera GB44031 I 0.000
GK10525 Drosophila willistoni FBgn0212540 I 0.000
GM17128 Drosophila sechellia FBgn0172039 I 0.000
GL18753 Drosophila persimilis FBgn0156354 I 0.000
CpipJ_CPIJ002469 Culex pipiens CpipJ_CPIJ002469 I 0.000
GF15103 Drosophila ananassae FBgn0092128 I 0.000
GA19765 Drosophila pseudoobscura FBgn0079761 I 0.000
dl Drosophila simulans FBgn0067500 I 0.000
dl Drosophila yakuba FBgn0067431 I 0.000
CPIJ002469 Culex quinquefasciatus CPIJ002469 I 0.000
REL1 Anopheles gambiae AGAP009515 I 0.000
ACYPI005133 Acyrthosiphon pisum ACYPI005133 I 0.000
ACEP24572 Atta cephalotes ACEP24572 I 0.000
REL1A Aedes aegypti AAEL007696 I 0.000
e_gw.42.109.1 Branchiostoma floridae e_gw.42.109.1 N 0.000