ENSPPYG00000002599 (Pongo abelii)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00554 (RHD_DNA_bind) IPR011539 ENSPPYG00000002599 T317437_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFKB2
M03446_2.00 		Homo sapiens
NGGGGAWTCCCCB
VGGGGAWTCCCCN		 SELEX
Jolma et al.(2013)
NFKB2_1 		1.000 1.000
NFKB2
M05699_2.00 		Homo sapiens
HGGKRNWTCCCCN
NGGGGAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_HT-SELEX 		1.000 1.000
NFKB2
M09344_2.00 		Homo sapiens
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_HUMAN.H11MO.0.B 		1.000 1.000
NFKB2
M05700_2.00 		Homo sapiens
HGGKRNWTYCCCN
NGGGRAWNYMCCD		 SELEX
Yin et al.(2017)
NFKB2_eDBD_Methyl-HT-SELEX 		1.000 1.000
Nfkb2
M09356_2.00 		Mus musculus
GGGRHTTYCCC
GGGRAADYCCC		 Misc
Kulakovskiy et al.(2013)
NFKB2_MOUSE.H11MO.0.C 		0.976 0.976
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000003023 Rel 40 220

Links

Other Rel family TFs
Other Pongo abelii TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
STOP1 Arabidopsis thaliana AT1G34370 D
Eucgr.F02627 Eucalyptus grandis Eucgr.F02627 I
TRIUR3_13796 Triticum urartu TRIUR3_13796 I
Ciclev10000850m.g Citrus clementina Ciclev10000850m.g I
Carubv10008876m.g Capsella rubella Carubv10008876m.g I
Cagra.12398s0002 Capsella grandiflora Cagra.12398s0002 I
Bostr.1040s0032 Boechera stricta Bostr.1040s0032 I
Aquca_017_00778 Aquilegia coerulea Aquca_017_00778 I
mgf000060m Mimulus guttatus mgf000060m I
Cucsa.079940 Cucumis sativus Cucsa.079940 I
cassava24483.valid.m1 Manihot esculenta cassava24483.valid.m1 I
cassava22193.valid.m1 Manihot esculenta cassava22193.valid.m1 I
Pm022201 Prunus mume Pm022201 I
Cla016623 Citrullus lanatus Cla016623 I
Ca_04300 Cicer arietinum Ca_04300 I
STOP1 Vitis vinifera VIT_18s0072g00840 I
PK23301.1 Cannabis sativa PK23301.1 I
gene27486-v1.0-hybrid Fragaria vesca gene27486-v1.0-hybrid I
Gorai.006G131700 Gossypium raimondii Gorai.006G131700 I
Lus10009435.g Linum usitatissimum Lus10009435.g I
MDP0000141403 Malus domestica MDP0000141403 I
MDP0000199559 Malus domestica MDP0000199559 I
MDP0000453148 Malus domestica MDP0000453148 I
MDP0000551046 Malus domestica MDP0000551046 I
MDP0000807856 Malus domestica MDP0000807856 I
orange1.1g009831m.g Citrus sinensis orange1.1g009831m.g I
Pavir.J06328 Panicum virgatum Pavir.J06328 I
Pavir.J12018 Panicum virgatum Pavir.J12018 I
Pavir.J14096 Panicum virgatum Pavir.J14096 I
SapurV1A.0287s0150 Salix purpurea SapurV1A.0287s0150 I
SapurV1A.2334s0030 Salix purpurea SapurV1A.2334s0030 I
Thhalv10007411m.g Eutrema salsugineum Thhalv10007411m.g I
AMTR_s00017p00086440 Amborella trichopoda AMTR_s00017p00086440 I
OB01G47470 Oryza brachyantha OB01G47470 I
BGIOSGA004888 Oryza indica BGIOSGA004888 I
Bo8g027000 Brassica oleracea Bo8g027000 I
Bra040971 Brassica rapa Bra040971 I
BRADI2G56320 Brachypodium distachyon BRADI2G56320 I
F775_04088 Aegilops tauschii F775_04088 I
STOP1 Arabidopsis lyrata fgenesh2_kg.1__3547__AT1G34370.2 I
GLYMA10G35940 Glycine max GLYMA10G35940 I
GLYMA16G27280 Glycine max GLYMA16G27280 I
GLYMA20G31650 Glycine max GLYMA20G31650 I
GRMZM2G075956 Zea mays GRMZM2G075956 I
GRMZM2G129428 Zea mays GRMZM2G129428 I
GSMUA_Achr10G15970_001 Musa acuminata GSMUA_Achr10G15970_001 I
GSMUA_Achr5G01170_001 Musa acuminata GSMUA_Achr5G01170_001 I
LPERR01G33350 Leersia perrieri LPERR01G33350 I
MLOC_10987 Hordeum vulgare MLOC_10987 I
Traes_3DL_0284E68CC1 Triticum aestivum Traes_3DL_0284E68CC1 I
OBART01G38810 Oryza barthii OBART01G38810 I
OLONG_020555 Oryza longistaminata OLONG_020555 I
ONIVA01G43630 Oryza nivara ONIVA01G43630 I
OPUNC01G37530 Oryza punctata OPUNC01G37530 I
ORUFI01G42150 Oryza rufipogon ORUFI01G42150 I
OS01G0871200 Oryza sativa OS01G0871200 I
PGSC0003DMG400009234 Solanum tuberosum PGSC0003DMG400009234 I
POPTR_0019s11520 Populus trichocarpa POPTR_0019s11520 I
PRUPE_ppa004510mg Prunus persica PRUPE_ppa004510mg I
Sb03g041170 Sorghum bicolor Sb03g041170 I
Si001053m.g Setaria italica Si001053m.g I
Solyc11g017140.1 Solanum lycopersicum Solyc11g017140.1 I
TCM_036719 Theobroma cacao TCM_036719 I
Traes_3AL_00FAACD5D Triticum aestivum Traes_3AL_00FAACD5D I
TRAES3BF044200110CFD_g Triticum aestivum TRAES3BF044200110CFD_g I