CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000012895
(
Pelodiscus sinensis
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSPSIG00000012895
T317452_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RELB
M08161_2.00
Homo sapiens
NNATTCCCCNN
NNGGGGAATNN
ChIP-seq
Mathelier et al.(2014)
MA1117.1
0.783
0.783
RELB
M09347_2.00
Homo sapiens
VGGGRMTTTSMH
DKSAAAKYCCCB
Misc
Kulakovskiy et al.(2013)
RELB_HUMAN.H11MO.0.C
0.783
0.783
RELB
M11227_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RELBP50_Q3
0.783
0.783
Relb
M09352_2.00
Mus musculus
VGGGRMTTTSMH
DKSAAAKYCCCB
Misc
Kulakovskiy et al.(2013)
RELB_MOUSE.H11MO.0.C
0.765
0.765
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000014437
Rel
18
186
VWFTEQPKQRGMRFRYECEGRSAGSILGESSTDANKTLPAIELLNCQKIPEVKVVACLVWKDWPHRIHPHSLVGKDCSNGLCEISLRPQANPKHSFNNLGIQCVKKKEIEAAIEKKLQLGIDPFKAGSLKNHQEVDMNVVRICFQASYQEPSGQTRQLSPVLSEPIFDK
Links
Other
Rel
family TFs
Other
Pelodiscus sinensis
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M407DRAFT_26637
Tulasnella calospora
M407DRAFT_26637
N
0.000
M407DRAFT_26638
Tulasnella calospora
M407DRAFT_26638
N
0.000
M407DRAFT_33252
Tulasnella calospora
M407DRAFT_33252
N
0.000